> The weird thing is that / (/dev/hda5) shouldn't be being checked at all at 
> this point
The root filesystem is first checked by /etc/init.d/checkroot.sh, but is 
checked again by checkfs.sh together with all other filesystems.

Interestingly, during the aftermath of a power failure, I've come to
encounter this very same message on a number of machines at work in the
past weeks. fsck would not only complain about the root inode, but also
about even graver inconsistencies. The ext2 filesystems were essentially
wrecked, with no journal to recover from (*sigh*).

The simplest solution to your problem is probably to boot from live CD,
backup your root filesystem (e.g. `tar --create --one-file-system / -f
/somewhere/else/root-backup.tar`), create a new ext3fs on hda5, then
restore your backup. This won't tell you or me what went wrong in the
first place, but at least it should give you a working system.

PS: You're not, by chance, having this problem using a Pyramid server,
are you? ;)

-- 
filesystem check fails on boot, but filesystem isn't bad
https://launchpad.net/bugs/48563

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