I am unable to troubleshoot since I no longer have the old known_hosts
file. But, accessing directly seems to do the same thing as Connect to
Server, so I imagine the results would be the same. It seemed almost
like gvfs wasn't expecting this scenario and eventually timed out
because it didn't know what to do when asked the question about
confirming the connecting to a previously known host that has a
different rsa key than was expected.

If you know how to generate a new host key for an SSH server without
reinstalling the OS, I will try to reproduce the problem with a virtual
machine as the SSH server.

-- 
Connect To Server reports Timeout reached when connecting to an SSH host with a 
different RSA key
https://bugs.launchpad.net/bugs/215700
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