This is fixed now in intrepid. It will search for the proxy based on the
apt.conf configuration, the synaptic configuration and the gconf
environemnt (and of course the http_proxy environment).
** Changed in: update-manager (Ubuntu)
Status: Confirmed => Fix Released
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Ubuntu 'do_release_upgrade" doesn't work behind proxy
https://bugs.launchpad.net/bugs/115388
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