Did anyone ever forward this to Debian?

The patch seems reasonable to me. I don't know of any situation where
bdb/hdb/mdb create subdirectories under /var/lib/ldap, only files.

I've committed this to the pkg-openldap Git repository. Thanks for the
patch!

** Also affects: openldap (Debian)
   Importance: Undecided
       Status: New

** Changed in: openldap (Debian)
       Status: New => Fix Committed

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https://bugs.launchpad.net/bugs/1003854

Title:
  Database upgrade/migration fails with nested db directories (lucid to
  precise)

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