Im having the same problem. I have an ATI Radeon™ HD 2400 Pro AGP card.

dmesg

[   67.512038] radeon 0000:01:00.0: GPU lockup CP stall for more than 10000msec
[   67.512045] ------------[ cut here ]------------
[   67.512092] WARNING: at 
/build/buildd/linux-2.6.38/drivers/gpu/drm/radeon/radeon_fence.c:248 
radeon_fence_wait+0x2ea/0x350 [radeon]()
[   67.512097] Hardware name: P4V88
[   67.512100] GPU lockup (waiting for 0x000006CA last fence id 0x000006C6)
[   67.512103] Modules linked in: parport_pc ppdev lp dm_crypt parport 
snd_via82xx gameport snd_ac97_codec ac97_bus snd_pcm binfmt_misc snd_page_alloc 
snd_mpu401_uart snd_seq_midi snd_rawmidi snd_seq_midi_event arc4 rt61pci 
crc_itu_t snd_seq rt2x00pci rt2x00lib psmouse snd_timer mac80211 snd_seq_device 
joydev serio_raw snd cfg80211 i2c_viapro soundcore shpchp eeprom_93cx6 squashfs 
aufs nls_iso8859_1 nls_cp437 vfat fat dm_raid45 xor btrfs zlib_deflate 
libcrc32c radeon usbhid ttm hid drm_kms_helper drm usb_storage uas i2c_algo_bit 
via_rhine sata_via pata_via
[   67.512168] Pid: 3025, comm: compiz Not tainted 2.6.38-8-generic #42-Ubuntu
[   67.512171] Call Trace:
[   67.512185]  [<c104f912>] ? warn_slowpath_common+0x72/0xa0
[   67.512210]  [<f828366a>] ? radeon_fence_wait+0x2ea/0x350 [radeon]
[   67.512234]  [<f828366a>] ? radeon_fence_wait+0x2ea/0x350 [radeon]
[   67.512240]  [<c104f9e3>] ? warn_slowpath_fmt+0x33/0x40
[   67.512263]  [<f828366a>] ? radeon_fence_wait+0x2ea/0x350 [radeon]
[   67.512273]  [<c106d370>] ? autoremove_wake_function+0x0/0x50
[   67.512296]  [<f8283ed1>] ? radeon_sync_obj_wait+0x11/0x20 [radeon]
[   67.512309]  [<f80e1719>] ? ttm_bo_wait+0xd9/0x170 [ttm]
[   67.512320]  [<f80e3dc2>] ? ttm_bo_move_accel_cleanup+0x162/0x1e0 [ttm]
[   67.512344]  [<f82841aa>] ? radeon_move_blit.clone.0+0x13a/0x1b0 [radeon]
[   67.512368]  [<f8284465>] ? radeon_move_ram_vram.clone.2+0x105/0x120 [radeon]
[   67.512378]  [<f80e19f2>] ? ttm_bo_list_ref_sub+0x22/0x30 [ttm]
[   67.512388]  [<f80e0072>] ? ttm_tt_set_caching+0x2/0x1f0 [ttm]
[   67.512410]  [<f828462a>] ? radeon_bo_move+0x1aa/0x1c0 [radeon]
[   67.512420]  [<f80e21c0>] ? ttm_bo_unmap_virtual_locked+0x50/0x60 [ttm]
[   67.512443]  [<f8284480>] ? radeon_bo_move+0x0/0x1c0 [radeon]
[   67.512453]  [<f80e22fd>] ? ttm_bo_handle_move_mem+0x12d/0x380 [ttm]
[   67.512477]  [<f8285930>] ? radeon_bo_move_notify+0x0/0x30 [radeon]
[   67.512487]  [<f80e3195>] ? ttm_bo_move_buffer+0x125/0x140 [ttm]
[   67.512498]  [<f80e19f2>] ? ttm_bo_list_ref_sub+0x22/0x30 [ttm]
[   67.512506]  [<f80e0072>] ? ttm_tt_set_caching+0x2/0x1f0 [ttm]
[   67.512516]  [<f80e3258>] ? ttm_bo_validate+0xa8/0x120 [ttm]
[   67.512539]  [<f8285533>] ? radeon_bo_list_validate+0x73/0xd0 [radeon]
[   67.512567]  [<f829c619>] ? radeon_cs_parser_relocs+0x209/0x250 [radeon]
[   67.512594]  [<f829c8a9>] ? radeon_cs_parser_init+0x249/0x2a0 [radeon]
[   67.512621]  [<f829ca25>] ? radeon_cs_ioctl+0x75/0x180 [radeon]
[   67.512642]  [<f80b4cd1>] ? drm_ioctl+0x1e1/0x470 [drm]
[   67.512671]  [<f829c9b0>] ? radeon_cs_ioctl+0x0/0x180 [radeon]
[   67.512680]  [<c1101627>] ? handle_mm_fault+0xb7/0x120
[   67.512687]  [<c150ce00>] ? do_page_fault+0x0/0x490
[   67.512691]  [<c150d02f>] ? do_page_fault+0x22f/0x490
[   67.512705]  [<f80b4af0>] ? drm_ioctl+0x0/0x470 [drm]
[   67.512711]  [<c11367cb>] ? do_vfs_ioctl+0x7b/0x2e0
[   67.512716]  [<c1136ab7>] ? sys_ioctl+0x87/0x90
[   67.512721]  [<c1054f02>] ? sys_gettimeofday+0x32/0x70
[   67.512727]  [<c1509bf4>] ? syscall_call+0x7/0xb
[   67.512732]  [<c1500000>] ? print_cpu_info+0xe3/0x126
[   67.512735] ---[ end trace 88331dc8f6844363 ]---
[   67.512749] [drm] Disabling audio support
[   67.513780] radeon 0000:01:00.0: f4648800 unpin not necessary
[   67.513787] radeon 0000:01:00.0: GPU softreset 
[   67.513791] radeon 0000:01:00.0:   R_008010_GRBM_STATUS=0xE57024E0
[   67.513795] radeon 0000:01:00.0:   R_008014_GRBM_STATUS2=0x00110103
[   67.513799] radeon 0000:01:00.0:   R_000E50_SRBM_STATUS=0x200010C0
[   67.513811] radeon 0000:01:00.0:   R_008020_GRBM_SOFT_RESET=0x00007FEE
[   67.528701] radeon 0000:01:00.0: R_008020_GRBM_SOFT_RESET=0x00000001
[   67.544584] radeon 0000:01:00.0:   R_008010_GRBM_STATUS=0xA0003030
[   67.544589] radeon 0000:01:00.0:   R_008014_GRBM_STATUS2=0x00000003
[   67.544593] radeon 0000:01:00.0:   R_000E50_SRBM_STATUS=0x200080C0
[   67.545588] radeon 0000:01:00.0: GPU reset succeed
[   67.565464] radeon 0000:01:00.0: WB disabled
[   67.596797] [drm] ring test succeeded in 1 usecs
[   67.596810] [drm] ib test succeeded in 1 usecs
[   67.596814] [drm] Enabling audio support

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https://bugs.launchpad.net/bugs/774909

Title:
  radeon GPU lockup CP stall for more than 10000msec

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