I found a solution at the IRC chatlog:
http://irclogs.ubuntu.com/2012/02/09/%23ubuntu-arm.txt

The instructions there (starts at [12:11]) are actually wrong or
outdated, it's not "--remove" but "--remove-all":

sudo update-alternatives --remove-all gl_conf

This solved the issue in my AC100.

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You received this bug notification because you are a member of Ubuntu-X,
which is subscribed to nvidia-graphics-drivers-tegra in Ubuntu.
https://bugs.launchpad.net/bugs/993228

Title:
  package nvidia-tegra 12~beta1-1ubuntu3 failed to install/upgrade:
  subproces installed post-installation script gaf een foutwaarde 2
  terug

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