Yes, both are installed. Looking at the segmentation fault hotspot log
from my java application, it says libwayland and mesa-egl are being
loaded. I don't have gnome-session-wayland even installed and mesa
shouldn't be loaded if fglrx is being used. I've attached the java log
as well.

** Attachment added: "java segmentation fault log"
   
https://bugs.launchpad.net/ubuntu/+source/fglrx-installer/+bug/1493888/+attachment/4512735/+files/hs_err_pid2000.log

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which is subscribed to fglrx-installer in Ubuntu.
https://bugs.launchpad.net/bugs/1493888

Title:
  FGLRX incompatible with gcc 5

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