Sorry, after talking with the xorg developers I realized that the above change 
is not really correct.  Instead, there should be a change in the 
gnome-settings-daemon.  gnome-settings-daemon-2.28.0
in file /plugins/mouse/gsd-mouse-manager.c  set_tap_to_click (gboolean state)

-                                /* Set RLM mapping for 1/2/3 fingers*/
-                                data[4] = (state) ? 1 : 0;
-                                data[5] = (state) ? 3 : 0;
-                                data[6] = (state) ? 2 : 0;
+                                /* Set RLM mapping for 1/2/3 fingers*/
+                                data[4] = (state) ? 1 : 0;
+                                data[5] = (state) ? 2 : 0;
+                                data[6] = (state) ? 3 : 0;

This will swap the values to what they were in previous releases

-- 
Action for middle and right click is reversed since jaunty
https://bugs.launchpad.net/bugs/432814
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which is subscribed to xserver-xorg-input-synaptics in ubuntu.

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