I am using Pymol on Jaunty and came across a similar bug. The error I see is this: Match-Error: unable to open matrix file '/usr/share/pymol/pymol/matrices/BLOSUM62'.
When I checked, I noticed that /usr/share/pymol directory does not have another 'pymol' directory. However, /usr/share/pymol has a 'matrices' directory in which BLOSUM62 is present. So, I created a 'pymol' directory in /usr/share/pymol and made a symlink to matrices folder there. That fixed it! But this is something that may need to be fixed so that it works out of the box. -- pymol can not find the BLOSUM62 matrix; wrong path https://bugs.launchpad.net/bugs/71045 You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. -- ubuntu-bugs mailing list ubuntu-b...@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs -- universe-bugs mailing list universe-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/universe-bugs