Did you observe anything interesting with such a large Java heap?
You said you have 3G for the memstore, most of the rest is for the block cache 
I assume.
Any long GC pauses, or other strange behavior?

Thanks.

-- Lars



________________________________
 From: Timo Schaepe <t...@timoschaepe.de>
To: user@hbase.apache.org 
Sent: Saturday, December 14, 2013 5:27 AM
Subject: Re: Problems with hbase.hregion.max.filesize
 

Sorry, forgot our Hardwareconfiguration…

1 NameNode/SecondaryNameNode/HBase master
31 Datanodes/Regionserver

All of them with
2x XEON E5-2640 2.5 GHz
128 GB RAM 
/dev/sda 90 GB 
/dev/sdb 1.1 TB 
/dev/sdc 1.1 TB

where sda are SSDs disks for system and sdb and sdc are disks for HDFS/HBase

Heapsize for Regionserver: 80 GB

bye,

    Timo



Am 14.12.2013 um 14:21 schrieb Timo Schaepe <t...@timoschaepe.de>:

> Hey,
> 
> @JM: Thanks for the hint with hbase.regionserver.fileSplitTimeout. At the 
> moment (the import is actually working) and after I splittet the specific 
> regions manually, we do not have growing regions anymore.
> 
> hbase hbck says, all things are going fine.
> 0 inconsistencies detected.
> Status: OK
> 
> @Ted Yu: Sure, have a look here: http://pastebin.com/2ANFVZEU
> The relevant tablename ist data_1091.
> 
> Thanks for your time.
> 
>     Timo
> 
> Am 13.12.2013 um 20:18 schrieb Ted Yu <yuzhih...@gmail.com>:
> 
>> Timo:
>> Can you pastebin regionserver log around 2013-12-12 13:54:20 so that we can
>> see what happened ?
>> 
>> Thanks
>> 
>> 
>> On Fri, Dec 13, 2013 at 11:02 AM, Jean-Marc Spaggiari <
>> jean-m...@spaggiari.org> wrote:
>> 
>>> Try to increase hbase.regionserver.fileSplitTimeout but put it back to its
>>> default value after.
>>> 
>>> Default value is 30 seconds. I think it's not normal for a split to take
>>> more than that.
>>> 
>>> What is your hardware configuration?
>>> 
>>> Have you run hbck to see if everything is correct?
>>> 
>>> JM
>>> 
>>> 
>>> 2013/12/13 Timo Schaepe <t...@timoschaepe.de>
>>> 
>>>> Hello again,
>>>> 
>>>> digging in the logs of the specific regionserver shows me that:
>>>> 
>>>> 2013-12-12 13:54:20,194 INFO
>>>> org.apache.hadoop.hbase.regionserver.SplitRequest: Running
>>> rollback/cleanup
>>>> of failed split of
>>>> 
>>> data,OR\x83\xCF\x02\x82\xAE\xF3U,1386851456415.d04cadb1b2252dafc476c138e9651ca7.;
>>>> Took too long to split the files and create the references, aborting
>>> split
>>>> 
>>>> This message appears two time, so it seems, that HBase tried to split the
>>>> region but it failed. I don't know why. How is the behaviour of HBase,
>>> if a
>>>> region split fails? Are there more tries to split this region again? I
>>>> didn't find any new tries in the log. Now I split the big regions
>>> manually
>>>> and this works. And also it seems, that HBase split the new regions again
>>>> to crunch they down to the given limit.
>>>> 
>>>> But also it is a mystery for me, why the split size in Hannibal shows me
>>>> 10 GB and in base-site.xml I put 2 GB…
>>>> 
>>>> Thanks,
>>>> 
>>>>       Timo
>>>> 
>>>> 
>>>> Am 13.12.2013 um 10:22 schrieb Timo Schaepe <t...@timoschaepe.de>:
>>>> 
>>>>> Hello,
>>>>> 
>>>>> during the loading of data in our cluster I noticed some strange
>>>> behavior of some regions, that I don't understand.
>>>>> 
>>>>> Scenario:
>>>>> We convert data from a mysql database to HBase. The data is inserted
>>>> with a put to the specific HBase table. The row key is a timestamp. I
>>> know
>>>> the problem with timestamp keys, but in our requirement it works quiet
>>>> well. The problem is now, that there are some regions, which are growing
>>>> and growing.
>>>>> 
>>>>> For example the table on the picture [1]. First, all data was
>>>> distributed over regions and node. And now, the data is written into only
>>>> one region, which is growing and I can see no splitting at all. Actually
>>>> the size of the big region is nearly 60 GB.
>>>>> 
>>>>> HBase version is 0.94.11. I cannot understand, why the splitting is not
>>>> happening. In hbase-site.xml I limit the hbase.hregion.max.filesize to 2
>>> GB
>>>> and HBase accepted this value.
>>>>> 
>>>>> <property>
>>>>>     <!--Loaded from hbase-site.xml-->
>>>>>     <name>hbase.hregion.max.filesize</name>
>>>>>     <value>2147483648</value>
>>>>> </property>
>>>>> 
>>>>> First mystery: Hannibal shows me the split size is 10 GB (see
>>>> screenshot).
>>>>> Second mystery: HBase is not splitting some regions neither at 2 GB nor
>>>> 10 GB.
>>>>> 
>>>>> Any ideas? Could be the timestamp rowkey cause this problem?
>>>>> 
>>>>> Thanks,
>>>>> 
>>>>>     Timo
>>>>> 
>>>>> [1] https://www.dropbox.com/s/lm286xkcpglnj1t/big_region.png
>>>> 
>>>> 
>>> 
> 

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