Because of the "opening regions" rpc call sent by master to the region server node6 got timed out after 1 minutes?
*RPC call was sent:* 2016-04-30 13:10:47,702 INFO org.apache.hadoop.hbase.master.AssignmentManager: Assigning 22 region(s) tors-node6.example.com,60020,1458723856883 *After 1 minute:* 2016-04-30 13:11:47,780 INFO org.apache.hadoop.hbase.master.AssignmentManager: Unable to communicate with rs-node6.example.com,60020,1458723856883 in order to assign regions, java.io.IOException: Call to rs-node6.example.com/172.16.6.6:60020 failed on local exception: org.apache.hadoop.hbase.ipc.CallTimeoutException: Call id=4, waitTime=60001, operationTimeout=60000 expired. 2016-04-30 13:11:47,783 DEBUG org.apache.hadoop.hbase.master.AssignmentManager: Force region state offline {d1c7f3f455f2529da82a2f713b5ee067 state=PENDING_OPEN, ts=1462021847743, server=rs-node6.example.com,60020,1458723856883} I have checked hbase source code, but don't find any specific timeout settings for "open region" rpc call I can use. So I guess the it's using the default "hbase.rpc.timeout", which defaults to 60secs. And since there are 20+ regions being assigned to node6 almost at the same moment, node6 gets overloaded and can't finish opening all of them within one minute. So this looks like a hbase bug to me (regions never get online when the region server failed to handle the OpenRegionRequest before the rpc timeout), am I right? On Fri, May 20, 2016 at 12:42 PM, Ted Yu <yuzhih...@gmail.com> wrote: > Looks like region d1c7f3f455f2529da82a2f713b5ee067 received CLOSE request > when it was opening, leading to RegionAlreadyInTransitionException. > > Was there any clue in master log why the close request was sent ? > > Cheers > > On Wed, May 4, 2016 at 8:02 PM, Shuai Lin <linshuai2...@gmail.com> wrote: > > > Hi Ted, > > > > The hbase version is 1.0.0-cdh5.4.8, shipped with cloudera CDH 5.4.8. The > > RS logs on node6 can be found here < > http://paste.openstack.org/raw/496174/ > > > > > . > > > > Thanks! > > > > Shuai > > > > On Thu, May 5, 2016 at 9:15 AM, Ted Yu <yuzhih...@gmail.com> wrote: > > > > > Can you pastebin related server log w.r.t. > > d1c7f3f455f2529da82a2f713b5ee067 > > > from rs-node6 ? > > > > > > Which release of hbase are you using ? > > > > > > Cheers > > > > > > On Wed, May 4, 2016 at 6:07 PM, Shuai Lin <linshuai2...@gmail.com> > > wrote: > > > > > > > Hi list, > > > > > > > > Last weekend I got a region server crashed, but some regions never > got > > > > online again on other RSes. I've gone through the logs, and here is > the > > > > timeline about some of the events: > > > > > > > > * 13:03:50 on of the region server, rs-node7, died because of a disk > > > > failure. Master started to split rs-node7's WALs > > > > > > > > > > > > 2016-04-30 13:03:50,953 INFO > > > > org.apache.hadoop.hbase.master.handler.ServerShutdownHandler: > Splitting > > > > logs for rs-node7.example.com,60020,1458724695128 before assignment; > > > > region > > > > count=133 > > > > 2016-04-30 13:03:50,966 DEBUG > > > > org.apache.hadoop.hbase.master.SplitLogManager: Scheduling batch of > > logs > > > to > > > > split > > > > 2016-04-30 13:03:50,966 INFO > > > > org.apache.hadoop.hbase.master.SplitLogManager: started splitting 33 > > logs > > > > in [hdfs://nameservice1/hbase/WALs/rs-node7.example.com > > > > ,60020,1458724695128-splitting] > > > > for [rs-node7.example.com,60020,1458724695128] > > > > > > > > * 13:10:47 WAL splits done, master began to re-assign regions > > > > > > > > 2016-04-30 13:10:47,655 INFO > > > > org.apache.hadoop.hbase.master.handler.ServerShutdownHandler: > > Reassigning > > > > 133 region(s) that rs-node7.example.com,60020,1458724695128 was > > carrying > > > > (and 0 regions(s) that were opening on this server) > > > > 2016-04-30 13:10:47,665 INFO > > > > org.apache.hadoop.hbase.master.AssignmentManager: Bulk assigning 133 > > > > region(s) across 6 server(s), round-robin=true > > > > 2016-04-30 13:10:47,667 INFO > > > > org.apache.hadoop.hbase.master.AssignmentManager: Assigning 22 > > region(s) > > > to > > > > rs-node1.example.com,60020,1458720625688 > > > > 2016-04-30 13:10:47,667 INFO > > > > org.apache.hadoop.hbase.master.AssignmentManager: Assigning 22 > > region(s) > > > to > > > > rs-node2.example.com,60020,1458721110988 > > > > 2016-04-30 13:10:47,667 INFO > > > > org.apache.hadoop.hbase.master.AssignmentManager: Assigning 22 > > region(s) > > > to > > > > rs-node3.example.com,60020,1458721713906 > > > > 2016-04-30 13:10:47,679 INFO > > > > org.apache.hadoop.hbase.master.AssignmentManager: Assigning 23 > > region(s) > > > to > > > > rs-node4.example.com,60020,1458722335527 > > > > 2016-04-30 13:10:47,691 INFO > > > > org.apache.hadoop.hbase.master.AssignmentManager: Assigning 22 > > region(s) > > > to > > > > rs-node5.example.com,60020,1458722992296 > > > > 2016-04-30 13:10:47,702 INFO > > > > org.apache.hadoop.hbase.master.AssignmentManager: Assigning 22 > > region(s) > > > to > > > > rs-node6.example.com,60020,1458723856883 > > > > > > > > * 13:11:47 the opening regions rpc sent by master to region servers > > timed > > > > out after 1 minutes > > > > > > > > 2016-04-30 13:11:47,780 INFO > > > > org.apache.hadoop.hbase.master.AssignmentManager: Unable to > communicate > > > > with rs-node3.example.com,60020,1458721713906 in order to assign > > regions > > > > java.io.IOException: Call to rs-node3.example.com/172.16.6.3:60020 > > > failed > > > > on local exception: org.apache.hadoop.hbase.ipc.CallTimeoutException: > > > Call > > > > id=4, waitTime=60001, operationTimeout=60000 expired. > > > > 2016-04-30 13:11:47,782 INFO > > > > org.apache.hadoop.hbase.master.GeneralBulkAssigner: Failed assigning > 22 > > > > regions to server rs-node6.example.com,60020,1458723856883, > > reassigning > > > > them > > > > 2016-04-30 13:11:47,782 INFO > > > > org.apache.hadoop.hbase.master.GeneralBulkAssigner: Failed assigning > 23 > > > > regions to server rs-node4.example.com,60020,1458722335527, > > reassigning > > > > them > > > > 2016-04-30 13:11:47,782 INFO > > > > org.apache.hadoop.hbase.master.GeneralBulkAssigner: Failed assigning > 22 > > > > regions to server rs-node3.example.com,60020,1458721713906, > > reassigning > > > > them > > > > 2016-04-30 13:11:47,783 DEBUG > > > > org.apache.hadoop.hbase.master.AssignmentManager: Force region state > > > > offline {a65660e421f114e93862194f7cc35644 state=OPENING, > > > ts=1462021907753, > > > > server=rs-node6.example.com,60020,1458723856883} > > > > > > > > > > > > * After that, part of the regions (40 out of 130 regions) never got > > > online, > > > > and the following lines were logged repeatly in master log: > > > > > > > > 2016-04-30 13:12:37,188 DEBUG > > > > org.apache.hadoop.hbase.master.AssignmentManager: update > > > > {d1c7f3f455f2529da82a2f713b5ee067 state=PENDING_OPEN, > ts=1462021957087, > > > > server=rs-node6.example.com,60020,1458723856883} the timestamp. > > > > 2016-04-30 13:12:37,188 DEBUG > > > > org.apache.hadoop.hbase.master.AssignmentManager: Region is already > in > > > > transition; waiting up to 10668ms > > > > > > > > $ grep 'AssignmentManager: update {d1c7f3f455f2529da82a2f713b5ee067' > > > > /var/log/hbase/hbase-cmf-hbase-MASTER-head.example.com.log.out.1|wc > -l > > > > 484 > > > > > > > > > > > > I've searched in mailing list archive and hbase JIRA, but didn't find > > any > > > > similar situations like this one. The most similar one is HBASE-14407 > > > > <https://issues.apache.org/jira/browse/HBASE-14407> , but after > > reading > > > > its > > > > discussion I don't think that's the same problem. > > > > > > > > Anyone have a clue? Thanks! > > > > > > > > Regards, > > > > Shuai > > > > > > > > > >