Have you seen this thread ?
http://search-hadoop.com/m/q3RTtW43zT1e2nfb&subj=Re+ibsnappyjava+so+failed+to+map+segment+from+shared+object
On Mon, Feb 15, 2016 at 7:09 PM, Paolo Villaflores <pbvillaflo...@gmail.com>
wrote:
>
> Hi,
>
>
>
> I am trying to run spark 1.6.0.
>
> I have previously just installed a fresh instance of hadoop 2.6.0 and hive
> 0.14.
>
> Hadoop, mapreduce, hive and beeline are working.
>
> However, as soon as I run `sc.textfile()` within spark-shell, it returns
> an error:
>
>
> $ spark-shell
> Welcome to
> ____ __
> / __/__ ___ _____/ /__
> _\ \/ _ \/ _ `/ __/ '_/
> /___/ .__/\_,_/_/ /_/\_\ version 1.6.0
> /_/
>
> Using Scala version 2.10.5 (Java HotSpot(TM) 64-Bit Server VM, Java
> 1.7.0_67)
> Type in expressions to have them evaluated.
> Type :help for more information.
> Spark context available as sc.
> SQL context available as sqlContext.
>
> scala> val textFile = sc.textFile("README.md")
> java.lang.IllegalArgumentException: java.lang.UnsatisfiedLinkError:
> /tmp/snappy-1.1.2-2ccaf764-c7c4-4ff1-a68e-bbfdec0a3aa1-libsnappyjava.so:
> /tmp/snappy-1.1.2-2ccaf764-c7c4-4ff1-a68e-bbfdec0a3aa1-libsnappyjava.so:
> failed to map segment from shared object: Operation not permitted
> at
> org.apache.spark.io.SnappyCompressionCodec.<init>(CompressionCodec.scala:156)
> at
> sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
> at
> sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
> at
> sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
> at
> java.lang.reflect.Constructor.newInstance(Constructor.java:526)
> at
> org.apache.spark.io.CompressionCodec$.createCodec(CompressionCodec.scala:72)
> at
> org.apache.spark.io.CompressionCodec$.createCodec(CompressionCodec.scala:65)
> at org.apache.spark.broadcast.TorrentBroadcast.org
> $apache$spark$broadcast$TorrentBroadcast$$setConf(TorrentBroadcast.scala:73)
> at
> org.apache.spark.broadcast.TorrentBroadcast.<init>(TorrentBroadcast.scala:80)
> at
> org.apache.spark.broadcast.TorrentBroadcastFactory.newBroadcast(TorrentBroadcastFactory.scala:34)
> at
> org.apache.spark.broadcast.BroadcastManager.newBroadcast(BroadcastManager.scala:63)
> at
> org.apache.spark.SparkContext.broadcast(SparkContext.scala:1326)
> at
> org.apache.spark.SparkContext$$anonfun$hadoopFile$1.apply(SparkContext.scala:1014)
> at
> org.apache.spark.SparkContext$$anonfun$hadoopFile$1.apply(SparkContext.scala:1011)
> at
> org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150)
> at
> org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:111)
> at
> org.apache.spark.SparkContext.withScope(SparkContext.scala:714)
> at
> org.apache.spark.SparkContext.hadoopFile(SparkContext.scala:1011)
> at
> org.apache.spark.SparkContext$$anonfun$textFile$1.apply(SparkContext.scala:832)
> at
> org.apache.spark.SparkContext$$anonfun$textFile$1.apply(SparkContext.scala:830)
> at
> org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150)
> at
> org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:111)
> at
> org.apache.spark.SparkContext.withScope(SparkContext.scala:714)
> at
> org.apache.spark.SparkContext.textFile(SparkContext.scala:830)
> at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:27)
> at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:32)
> at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:34)
> at $iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:36)
> at $iwC$$iwC$$iwC$$iwC.<init>(<console>:38)
> at $iwC$$iwC$$iwC.<init>(<console>:40)
> at $iwC$$iwC.<init>(<console>:42)
> at $iwC.<init>(<console>:44)
> at <init>(<console>:46)
> at .<init>(<console>:50)
> at .<clinit>(<console>)
> at .<init>(<console>:7)
> at .<clinit>(<console>)
> at $print(<console>)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> at java.lang.reflect.Method.invoke(Method.java:606)
> at
> org.apache.spark.repl.SparkIMain$ReadEvalPrint.call(SparkIMain.scala:1065)
> at
> org.apache.spark.repl.SparkIMain$Request.loadAndRun(SparkIMain.scala:1346)
> at
> org.apache.spark.repl.SparkIMain.loadAndRunReq$1(SparkIMain.scala:840)
> at
> org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:871)
> at
> org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:819)
> at
> org.apache.spark.repl.SparkILoop.reallyInterpret$1(SparkILoop.scala:857)
> at
> org.apache.spark.repl.SparkILoop.interpretStartingWith(SparkILoop.scala:902)
> at
> org.apache.spark.repl.SparkILoop.command(SparkILoop.scala:814)
> at
> org.apache.spark.repl.SparkILoop.processLine$1(SparkILoop.scala:657)
> at
> org.apache.spark.repl.SparkILoop.innerLoop$1(SparkILoop.scala:665)
> at org.apache.spark.repl.SparkILoop.org
> $apache$spark$repl$SparkILoop$$loop(SparkILoop.scala:670)
> at
> org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply$mcZ$sp(SparkILoop.scala:997)
> at
> org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply(SparkILoop.scala:945)
> at
> org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply(SparkILoop.scala:945)
> at
> scala.tools.nsc.util.ScalaClassLoader$.savingContextLoader(ScalaClassLoader.scala:135)
> at org.apache.spark.repl.SparkILoop.org
> $apache$spark$repl$SparkILoop$$process(SparkILoop.scala:945)
> at
> org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:1059)
> at org.apache.spark.repl.Main$.main(Main.scala:31)
> at org.apache.spark.repl.Main.main(Main.scala)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at
> sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
> at
> sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> at java.lang.reflect.Method.invoke(Method.java:606)
> at
> org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:731)
> at
> org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:181)
> at
> org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:206)
> at
> org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:121)
> at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
> Caused by: java.lang.UnsatisfiedLinkError: /tmp/
> snappy-1.1.2-2ccaf764-c7c4-4ff1-a68e-bbfdec0a3aa1-libsnappyjava.so: /tmp/
> snappy-1.1.2-2ccaf764-c7c4-4ff1-a68e-bbfdec0a3aa1-libsnappyjava.so:
> failed to map segment from shared object: Operation not permitted
> at java.lang.ClassLoader$NativeLibrary.load(Native Method)
> at java.lang.ClassLoader.loadLibrary1(ClassLoader.java:1965)
> at java.lang.ClassLoader.loadLibrary0(ClassLoader.java:1890)
> at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1851)
> at java.lang.Runtime.load0(Runtime.java:795)
> at java.lang.System.load(System.java:1062)
> at
> org.xerial.snappy.SnappyLoader.loadNativeLibrary(SnappyLoader.java:174)
> at org.xerial.snappy.SnappyLoader.load(SnappyLoader.java:152)
> at org.xerial.snappy.Snappy.<clinit>(Snappy.java:46)
> at
> org.apache.spark.io.SnappyCompressionCodec.<init>(CompressionCodec.scala:154)
> ... 69 more
>
>
> There is not a lot in spark's conf. The setup for spark were as per:
> http://www.tutorialspoint.com/apache_spark/apache_spark_installation.htm
>
> I have already made certain that everything in /tmp is world accessible
> (uog+rwx).
>
> Any advice/ideas would be much appreciated.
>
>
> Cheers,
> Paolo
>
>
