Thanks to the hard work by the Biomart team - I was able to download the
new Biomart version 0.8 to install and deploy on my RH Linux server...
Everything seems working alright, except that the serve "ram away" a few
times (quitely die). The observations are:
I use Xming to operate remote Biomart GUI on my Windows XP. I can start
the Biomart with "biomart-server.sh" GUI. When done I can close the GUI
and release the shell to it prompt, and even logout from the shell, while
Biomart is running. However I have to keep my Xming alive in the
background. When I attempt to turn off Xming, it warns:
There are currently 2 clients connected; Shut down these client/server?
If I close Xming on my PC, the Biomart on my remote Linux dies.
I also tried to run the server from the command line, as in:
> /usr/local/biomart/dist/scripts/biomart-server.sh start
Sometimes it complains there is already a biomart running, while
"biomart-server.sh stop" won't really stop it, that I had to kill the
process (it's a short process name, different from normal) to try again.
Sometimes it starts, but I got errors on the http/web:
HTTP Error, problem accessing /.Reason: Cannot find
Any advice please?
Zhiliang
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