Hi all,
I run the dmol3 of MaterialsStudio55 standalonely by using pbs queueing
system.
In the pbs script for my job, I use the following lines:
-------
# Set filenames for PBS to log standard error and standard output.
#PBS -o stdout
#PBS -e stderr
---------
After the job has been finished, I find the following information in the
stderr file in the current directory:
-------------
zhaohongsheng@node32:~/work/Dr.Zhao/dmol3_test> cat stderr
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77489120701/Ge.tpdensk'cp:
cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283602120619/Ge.tpdensk':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283591120619/Ge.tpdensk':
No such file or directory
: No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77423120701/Ge.tpdensk':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77456120701/Ge.tpdensk':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77478120701/Ge.tpdensk':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d774910120701/Ge.tpdensk':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77434120701/Ge.tpdensk':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77445120701/Ge.tpdensk':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283602120619/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283591120619/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77467120701/Ge.tpdensk':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77423120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77456120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77489120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d774910120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77478120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77445120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283602120619/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283591120619/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77423120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77434120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77467120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77456120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d774910120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77489120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77478120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77445120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77467120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77434120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77445120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77478120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283602120619/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77434120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283591120619/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77456120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77423120701/Ge.tpdensk_'cp:
cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d774910120701/Ge.tpdensk_':
No such file or directory
: No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77489120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77467120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77478120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283602120619/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77445120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283591120619/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77456120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77434120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77489120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77423120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d774910120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77467120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283591120619/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283602120619/Ge.tpdensk_':
No such file or directory
cp: cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77467120701/Ge.tpdensk_'cannot
stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77478120701/Ge.tpdensk_':
No such file or directory: No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77423120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77489120701/Ge.tpdensk_'cp:
cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77456120701/Ge.tpdensk_'cp:
cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77445120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77434120701/Ge.tpdensk_':
No such file or directory
: No such file or directory
: No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d774910120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283591120619/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283602120619/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77467120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77478120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77423120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283591120619/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77445120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d774910120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77434120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77489120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77456120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d283602120619/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77467120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77423120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d774910120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77478120701/Ge.tpdensk_'cp:
cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77445120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77434120701/Ge.tpdensk_':
No such file or directory
: No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77489120701/Ge.tpdensk_':
No such file or directory
cp: cannot stat
`/public/home/zhaohongsheng/work/Dr.Zhao/dmol3_test/tmp/d77456120701/Ge.tpdensk_':
No such file or directory
zhaohongsheng@node32:~/work/Dr.Zhao/dmol3_test>
--------------
But, it seems that the job has been preformed successfully. I cann't
figure out why does this happen. Any hints will highly appreciated.
Best regards
--
Hongsheng Zhao <[email protected]>
School of Physics and Electrical Information Science,
Ningxia University, Yinchuan 750021, China
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