Rayson Program received signal SIGSEGV, Segmentation fault. [Switching to Thread 0xb51ffb70 (LWP 3441)] 0x0824ce78 in sge_get_message_id_output_implementation () (gdb) bt #0 0x0824ce78 in sge_get_message_id_output_implementation () #1 0x0824cf0d in sge_gettext_ () #2 0x08239fae in sge_monitor_init () #3 0x08056463 in sge_signaler_main () #4 0x00166a49 in start_thread () from /lib/libpthread.so.0 #5 0x00259e5e in clone () from /lib/libc.so.6
Let me know if you want/need any more info -Karl On Mon, Aug 27, 2012 at 10:45:19AM -0400, Rayson Ho wrote: > Most of our users don't run 32-bit Linux, but we tested it and it > worked for us (earlier RHEL versions, but not CentOS 6.3). Can you run > the qmaster under gdb so that gdb would show the stack trace? > > Rayson > > > > On Mon, Aug 27, 2012 at 10:35 AM, Karl Vollmer <[email protected]> wrote: > > Hello, > > > > I recently tried installing GE2011.11p1 and after configuring it I get a > > seg-fault when trying to start the qmaster. If anyone has any insight I > > would appreciate the help. > > > > OS: Centos 6.3x86_32 > > > > I used/use the following set of commands to install GE2011, you'll note > > the > > .po file mojo at the end, not sure if that's required but it did remove > > some > > errors from the debug log. > > > > ---- > > export JAVA_HOME=/usr/lib/jvm/java-openjdk/ > > ./aimk -only-depend > > ./scripts/zerodepend > > ./aimk depend > > ./aimk -no-java -no-jni -no-secure -spool-classic -no-dump -intl > > ./aimk -man > > ./scripts/distinst -y -basedir /opt/ge -vdir GE2011.11p1 -all -noexit > > ln -s /usr/src/${PKGNAME}/source/scripts/mk_dist /opt/ge/GE2011.11p1/mk_dist > > cp -r /usr/src/${PKGNAME}/source/dist/locale /opt/ge/GE2011.11p1/ > > mkdir -p /opt/ge/GE2011.11p1/locale/en/LC_MESSAGES/linux-x86 > > cp /opt/ge/GE2011.11p1/locale/en/LC_MESSAGES/gridengine.po > > /opt/ge/GE2011.11p1/locale/en/LC_MESSAGES/linux-x86 > > msgfmt /opt/ge/GE2011.11p1/locale/en/LC_MESSAGES/linux-x86/gridengine.po -o > > /opt/ge/GE2011.11p1/locale/en/LC_MESSAGES/linux-x86/gridengine.mo > > ---- > > > > Packages installed to support GE2011 > > > > package { 'java-1.7.0-openjdk': ensure => installed } > > package { 'java-1.7.0-openjdk-devel': ensure => installed } > > package { 'lib-X11-devel': ensure => installed } > > package { 'openssl-static': ensure => installed } > > package { 'tcsh': ensure => installed } > > package { 'pam-devel': ensure => installed } > > package { 'openmotif-devel': ensure => installed } > > package { 'openssl': ensure => installed } > > package { 'openssl-devel': ensure => installed } > > package { 'libXpm-devel': ensure => installed } > > package { 'ncurses-devel': ensure => installed } > > package { 'ncurses': ensure => installed } > > package { 'texinfo': ensure => installed } > > package { 'unzip': ensure => installed } > > package { 'gettext': ensure => installed } > > package { 'gettext-devel': ensure => installed } > > > > Debug output from sge_qmaster > > > > starting sge_qmaster > > 0 2951 -1216837952 ****** starting localization procedure ... > > ********** > > 1 2951 -1216837952 could not get environment variable > > "GRIDPACKAGE" > > 2 2951 -1216837952 could not get environment variable > > "GRIDLOCALEDIR" > > 3 2951 -1216837952 setlocale() returns NULL 4 2951 > > -1216837952 locale directory: >/opt/ge/GE2011.1 > > 5 2951 -1216837952 package file: >linux-x86/gridengine.mo< > > 6 2951 -1216837952 language (LANG): >en< > > 7 2951 -1216837952 loading message file: > > /opt/ge/GE2011.11p1/locale/en/LC_MESSAGES/linux-x86/gridengine.mo > > 8 2951 -1216837952 found message file - ok > > 9 2951 -1216837952 setlocale() returns NULL > > 10 2951 -1216837952 bindtextdomain() returns > > "/opt/ge/GE2011.11p1/locale" > > 11 2951 -1216837952 textdomain() returns "linux-x86/gridengine" > > 12 2951 -1216837952 error id output : enabled > > 13 2951 -1216837952 ****** starting localization procedure ... > > success ** > > 14 2951 -1216837952 sge_qmaster is not daemonized > > 15 2951 -1216837952 returning port value: 7111 > > 16 2951 -1216837952 returning port value: 7112 > > 17 2951 -1216837952 Getting host by name - Linux > > 18 2951 -1216837952 1 names in h_addr_list > > 19 2951 -1216837952 1 names in h_aliases > > 20 2951 -1216837952 Getting host by name - Linux > > 21 2951 -1216837952 1 names in h_addr_list > > 22 2951 -1216837952 1 names in h_aliases > > 23 2951 main Getting host by name - Linux > > 24 2951 main 1 names in h_addr_list > > 25 2951 main 1 names in h_aliases > > 26 2951 main creating QMASTER handle > > 27 2951 main act_qmaster file contains local host name > > 28 2951 main auid=0; agid=0 > > 29 2951 main uid=0; gid=0; euid=0; egid=0 auid=0; agid=0 > > 30 2951 main Making dir > > "/opt/ge/GE2011.11p1/default/spool/qmaster/jobs" > > 31 2951 main retval = 0 > > 32 2951 main Making dir > > "/opt/ge/GE2011.11p1/default/spool/qmaster/zombies" > > 33 2951 main retval = 0 > > 34 2951 main Making dir > > "/opt/ge/GE2011.11p1/default/spool/qmaster/cqueues" > > 35 2951 main retval = 0 > > 36 2951 main Making dir > > "/opt/ge/GE2011.11p1/default/spool/qmaster/qinstances" > > 37 2951 main retval = 0 > > 38 2951 main Making dir > > "/opt/ge/GE2011.11p1/default/spool/qmaster/exec_hosts" > > 39 2951 main retval = 0 > > 40 2951 main Making dir > > "/opt/ge/GE2011.11p1/default/spool/qmaster/submit_hosts" > > 41 2951 main retval = 0 > > 42 2951 main Making dir > > "/opt/ge/GE2011.11p1/default/spool/qmaster/admin_hosts" > > 43 2951 main retval = 0 > > 44 2951 main Making dir > > "/opt/ge/GE2011.11p1/default/spool/qmaster/centry" > > 45 2951 main retval = 0 > > 46 2951 main Making dir > > "/opt/ge/GE2011.11p1/default/spool/qmaster/job_scripts" > > 47 2951 main retval = 0 > > 48 2951 main Making dir > > "/opt/ge/GE2011.11p1/default/spool/qmaster/pe" > > 49 2951 main retval = 0 > > 50 2951 main Making dir > > "/opt/ge/GE2011.11p1/default/spool/qmaster/ckpt" > > 51 2951 main retval = 0 > > 52 2951 main Making dir > > "/opt/ge/GE2011.11p1/default/spool/qmaster/usersets" > > 53 2951 main retval = 0 > > 54 2951 main Making dir > > "/opt/ge/GE2011.11p1/default/spool/qmaster/calendars" > > 55 2951 main retval = 0 > > 56 2951 main Making dir > > "/opt/ge/GE2011.11p1/default/spool/qmaster/hostgroups" > > 57 2951 main retval = 0 > > 58 2951 main Making dir > > "/opt/ge/GE2011.11p1/default/spool/qmaster/users" > > 59 2951 main retval = 0 > > 60 2951 main Making dir > > "/opt/ge/GE2011.11p1/default/spool/qmaster/projects" > > 61 2951 main retval = 0 > > 62 2951 main Making dir > > "/opt/ge/GE2011.11p1/default/spool/qmaster/resource_quotas" > > 63 2951 main retval = 0 > > 64 2951 main Making dir > > "/opt/ge/GE2011.11p1/default/spool/qmaster/advance_reservations" > > 65 2951 main retval = 0 > > 66 2951 main Making dir > > "/opt/ge/GE2011.11p1/default/common/local_conf" > > 67 2951 main retval = 0 > > 68 2951 main reading CONFIG "global" > > 69 2951 main reading CONFIG "veli.local" > > 70 2951 main qualified_hostname: 'veli.local' > > 71 2951 main Complex Attributes---------------------- > > 72 2951 main reading COMPLEX_ENTRY "s_vmem" > > 73 2951 main reading COMPLEX_ENTRY "s_core" > > 74 2951 main reading COMPLEX_ENTRY "virtual_used" > > 75 2951 main reading COMPLEX_ENTRY "s_rss" > > 76 2951 main reading COMPLEX_ENTRY "swap_total" > > 77 2951 main reading COMPLEX_ENTRY "load_long" > > 78 2951 main reading COMPLEX_ENTRY "virtual_free" > > 79 2951 main reading COMPLEX_ENTRY "np_load_avg" > > 80 2951 main reading COMPLEX_ENTRY "calendar" > > 81 2951 main reading COMPLEX_ENTRY "h_cpu" > > 82 2951 main reading COMPLEX_ENTRY "min_cpu_interval" > > 83 2951 main reading COMPLEX_ENTRY "h_rt" > > 84 2951 main reading COMPLEX_ENTRY "h_vmem" > > 85 2951 main reading COMPLEX_ENTRY "h_data" > > 86 2951 main reading COMPLEX_ENTRY "m_socket" > > 87 2951 main reading COMPLEX_ENTRY "mem_used" > > 88 2951 main reading COMPLEX_ENTRY "s_rt" > > 89 2951 main reading COMPLEX_ENTRY "virtual_total" > > 90 2951 main reading COMPLEX_ENTRY "swap_free" > > 91 2951 main reading COMPLEX_ENTRY "seq_no" > > 92 2951 main reading COMPLEX_ENTRY "slots" > > 93 2951 main reading COMPLEX_ENTRY "s_fsize" > > 94 2951 main reading COMPLEX_ENTRY "h_stack" > > 95 2951 main reading COMPLEX_ENTRY "h_fsize" > > 96 2951 main reading COMPLEX_ENTRY "load_avg" > > 97 2951 main reading COMPLEX_ENTRY "load_short" > > 98 2951 main reading COMPLEX_ENTRY "hostname" > > 99 2951 main reading COMPLEX_ENTRY "h_rss" > > 100 2951 main reading COMPLEX_ENTRY "np_load_short" > > 101 2951 main reading COMPLEX_ENTRY "arch" > > 102 2951 main reading COMPLEX_ENTRY "num_proc" > > 103 2951 main reading COMPLEX_ENTRY "np_load_medium" > > 104 2951 main reading COMPLEX_ENTRY "m_topology_inuse" > > 105 2951 main reading COMPLEX_ENTRY "h_core" > > 106 2951 main reading COMPLEX_ENTRY "tmpdir" > > 107 2951 main reading COMPLEX_ENTRY "s_data" > > 108 2951 main reading COMPLEX_ENTRY "rerun" > > 109 2951 main reading COMPLEX_ENTRY "qname" > > 110 2951 main reading COMPLEX_ENTRY "s_cpu" > > 111 2951 main reading COMPLEX_ENTRY "mem_total" > > 112 2951 main reading COMPLEX_ENTRY "s_stack" > > 113 2951 main reading COMPLEX_ENTRY "swap_rsvd" > > 114 2951 main reading COMPLEX_ENTRY "m_topology" > > 115 2951 main reading COMPLEX_ENTRY "cpu" > > 116 2951 main reading COMPLEX_ENTRY "load_medium" > > 117 2951 main reading COMPLEX_ENTRY "mem_free" > > 118 2951 main reading COMPLEX_ENTRY "swap_rate" > > 119 2951 main reading COMPLEX_ENTRY "np_load_long" > > 120 2951 main reading COMPLEX_ENTRY "m_core" > > 121 2951 main reading COMPLEX_ENTRY "swap_used" > > 122 2951 main reading COMPLEX_ENTRY "display_win_gui" > > 123 2951 main host_list---------------------------- > > 124 2951 main reading EXECHOST "global" > > 125 2951 main reading EXECHOST "template" > > 126 2951 main reading ADMINHOST "veli.local" > > 127 2951 main manager_list---------------------------- > > 128 2951 main root > > 129 2951 main host group definitions----------- > > 130 2951 main operator_list---------------------------- > > 131 2951 main userset_list------------------------------ > > 132 2951 main reading USERSET "deadlineusers" > > 133 2951 main reading USERSET "defaultdepartment" > > 134 2951 main reading USERSET "arusers" > > 135 2951 main calendar list ------------------------------ > > 136 2951 main resource quota list ----------------------- > > 137 2951 main > > cluster_queue_list--------------------------------- > > 138 2951 main pe_list--------------------------------- > > 139 2951 main ckpt_list--------------------------------- > > 140 2951 main advance reservation list > > ----------------------- > > 141 2951 main job_list----------------------------------- > > 142 2951 main user list----------------------------------- > > 143 2951 main project > > list----------------------------------- > > 144 2951 main scheduler config > > ----------------------------------- > > 145 2951 main reading SCHEDD_CONF "sched_configuration" > > 146 2951 main sconf_validate: no config to validate > > 147 2951 main share tree > > list----------------------------------- > > 148 2951 main reading SHARETREE "sharetree" > > 149 2951 main received qmaster_params are: none > > 150 2951 main event master functionality has been > > initialized > > 151 2951 -1275073680 /etc/init.d/sgemaster.p7111: line 760: 2951 > > Segmentation fault $bin_dir/sge_qmaster > > > > Strace (last few lines) > > > > open("qmaster.pid", O_WRONLY|O_CREAT|O_TRUNC|O_LARGEFILE, 0644) = 4 > > close(4) = 0 > > open("qmaster.pid", O_WRONLY|O_CREAT|O_TRUNC|O_LARGEFILE, 0666) = 4 > > fstat64(4, {st_mode=S_IFREG|0644, st_size=0, ...}) = 0 > > mmap2(NULL, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = > > 0xb7895000 > > write(4, "3273\n", 5) = 5 > > close(4) = 0 > > munmap(0xb7895000, 4096) = 0 > > mmap2(NULL, 10489856, PROT_READ|PROT_WRITE, > > MAP_PRIVATE|MAP_ANONYMOUS|MAP_STACK, -1, 0) = 0xb40ff000 > > mprotect(0xb40ff000, 4096, PROT_NONE) = 0 > > clone(child_stack=0xb4aff494, > > flags=CLONE_VM|CLONE_FS|CLONE_FILES|CLONE_SIGHAND|CLONE_THREAD|CLONE_SYSVSEM|CLONE_SETTLS|CLONE_PARENT_SET > > write(2, " 150 3273 main ", 27 150 3273 main ) = 27 > > write(2, 0xbfc7f170, 52 <unfinished ...> > > +++ killed by SIGSEGV +++ > > Segmentation fault > > > > Long enough? :D > > > > -Karl Vollmer > > > > _______________________________________________ > > users mailing list > > [email protected] > > https://gridengine.org/mailman/listinfo/users _______________________________________________ users mailing list [email protected] https://gridengine.org/mailman/listinfo/users
