Hi, I am submitting a job to the grid parallel environment using the command
qrsh -V -cwd -q 'queuename' -l h_vmem=2G -pe 'parallel env name' 4 sleep 20 There are two servers in the queue for example host1 and host2 The total h_vmem configured on the servers is 250G. After submitting the job the available h_vmem on both the servers is 246G The job is submitted to host2 but the h_vmem is occupied on both the hosts host1 and host2 Is this because the allocation rule configured in the queue is $round_robin. Can anyone please explain. Regards, Sudha -----Original Message----- From: Nicolás Serrano Martínez-Santos [mailto:nserr...@dsic.upv.es] Sent: Thursday, April 23, 2015 8:55 PM To: Sudha Padmini Penmetsa (WT01 - Global Media & Telecom) Cc: users Subject: Re: [gridengine users] Doubts regarding the h_vmem allocation Hi, qstat -F h_vmem -q <queue>@host is what I typically employ to inspect the current h_vmem on a specific host. Bests, NiCo Excerpts from sudha.penmetsa's message of 2015-04-23 17:04:22 +0200: > Hi, > > We can see the total h_vmem for a grid execution host using > > qconf -se nodeA | grep h_vmem > > Can you please help me in finding the available h_vmem on a grid execution > host. > > Regards, > Sudha > > -----Original Message----- > From: users-boun...@gridengine.org > [mailto:users-boun...@gridengine.org] On Behalf Of > users-requ...@gridengine.org > Sent: Wednesday, April 22, 2015 5:30 PM > To: users@gridengine.org > Subject: users Digest, Vol 52, Issue 22 > > Send users mailing list submissions to > users@gridengine.org > > To subscribe or unsubscribe via the World Wide Web, visit > https://gridengine.org/mailman/listinfo/users > or, via email, send a message with subject or body 'help' to > users-requ...@gridengine.org > > You can reach the person managing the list at > users-ow...@gridengine.org > > When replying, please edit your Subject line so it is more specific than "Re: > Contents of users digest..." > > > Today's Topics: > > 1. Doubts regarding the h_vmem allocation while submitting the > job in parallel environment (sudha.penme...@wipro.com) > 2. Re: Doubts regarding the h_vmem allocation while submitting > the job in parallel environment (Skylar Thompson) > > > ---------------------------------------------------------------------- > > Message: 1 > Date: Tue, 21 Apr 2015 12:01:04 +0000 > From: <sudha.penme...@wipro.com> > To: <users@gridengine.org> > Subject: [gridengine users] Doubts regarding the h_vmem allocation > while submitting the job in parallel environment > Message-ID: > > <sixpr03mb060709f0ee4c15d5645670d896...@sixpr03mb0607.apcprd03.prod.ou > tlook.com> > > Content-Type: text/plain; charset="us-ascii" > > Hi, > > Could you please explain how do we need allocate values for mem_free and > h_vmem while submitting the job in parallel environment. > > It would be helpful if you explain how should we calculate the value to be > allocated to h_vmem according to the slots using -pe parallelenvironmentname > slots. > > Regards, > Sudha > The information contained in this electronic message and any > attachments to this message are intended for the exclusive use of the > addressee(s) and may contain proprietary, confidential or privileged > information. If you are not the intended recipient, you should not > disseminate, distribute or copy this e-mail. Please notify the sender > immediately and destroy all copies of this message and any > attachments. WARNING: Computer viruses can be transmitted via email. > The recipient should check this email and any attachments for the > presence of viruses. The company accepts no liability for any damage > caused by any virus transmitted by this email. www.wipro.com > -------------- next part -------------- An HTML attachment was > scrubbed... > URL: > <http://gridengine.org/pipermail/users/attachments/20150421/83af22ec/a > ttachment-0001.html> > > ------------------------------ > > Message: 2 > Date: Tue, 21 Apr 2015 06:53:19 -0700 > From: Skylar Thompson <skyl...@u.washington.edu> > To: users@gridengine.org > Subject: Re: [gridengine users] Doubts regarding the h_vmem allocation > while submitting the job in parallel environment > Message-ID: <20150421135319.ga4...@utumno.gs.washington.edu> > Content-Type: text/plain; charset=us-ascii > > Hi Sudha, > > mem_free and h_vmem are standard consumable resources[1] so they scale > by slot. If you have a five-slot job that requests 1GB of address > space (-l > h_vmem=1G) then each slot will get 1GB of allowed address space, for 5GB > total. > > [1] You can check the consumable type with "qconf -sc" and look in the > consumable column. YES means requests scale by slot request, JOB means it > gets assigned to the entire job, and HOST to each node the job runs on. > > On Tue, Apr 21, 2015 at 12:01:04PM +0000, sudha.penme...@wipro.com wrote: > > Hi, > > > > Could you please explain how do we need allocate values for mem_free and > > h_vmem while submitting the job in parallel environment. > > > > It would be helpful if you explain how should we calculate the value to be > > allocated to h_vmem according to the slots using -pe > > parallelenvironmentname slots. > > > > Regards, > > Sudha > > The information contained in this electronic message and any > > attachments to this message are intended for the exclusive use of > > the > > addressee(s) and may contain proprietary, confidential or privileged > > information. If you are not the intended recipient, you should not > > disseminate, distribute or copy this e-mail. Please notify the > > sender immediately and destroy all copies of this message and any > > attachments. WARNING: Computer viruses can be transmitted via email. > > The recipient should check this email and any attachments for the > > presence of viruses. The company accepts no liability for any damage > > caused by any virus transmitted by this email. www.wipro.com > > > _______________________________________________ > > users mailing list > > users@gridengine.org > > https://gridengine.org/mailman/listinfo/users > > > -- > -- Skylar Thompson (skyl...@u.washington.edu) > -- Genome Sciences Department, System Administrator > -- Foege Building S046, (206)-685-7354 > -- University of Washington School of Medicine > > > ------------------------------ > > _______________________________________________ > users mailing list > users@gridengine.org > https://gridengine.org/mailman/listinfo/users > > > End of users Digest, Vol 52, Issue 22 > ************************************* > The information contained in this electronic message and any > attachments to this message are intended for the exclusive use of the > addressee(s) and may contain proprietary, confidential or privileged > information. If you are not the intended recipient, you should not > disseminate, distribute or copy this e-mail. Please notify the sender > immediately and destroy all copies of this message and any > attachments. WARNING: Computer viruses can be transmitted via email. > The recipient should check this email and any attachments for the > presence of viruses. The company accepts no liability for any damage > caused by any virus transmitted by this email. www.wipro.com > > _______________________________________________ > users mailing list > users@gridengine.org > https://gridengine.org/mailman/listinfo/users The information contained in this electronic message and any attachments to this message are intended for the exclusive use of the addressee(s) and may contain proprietary, confidential or privileged information. If you are not the intended recipient, you should not disseminate, distribute or copy this e-mail. Please notify the sender immediately and destroy all copies of this message and any attachments. WARNING: Computer viruses can be transmitted via email. The recipient should check this email and any attachments for the presence of viruses. The company accepts no liability for any damage caused by any virus transmitted by this email. www.wipro.com _______________________________________________ users mailing list users@gridengine.org https://gridengine.org/mailman/listinfo/users
