This is new to me too, but I am running SGE 6.x
From: [email protected] <[email protected]> On Behalf Of
Skylar Thompson
Sent: Tuesday, January 21, 2020 9:51 AM
To: [email protected]
Subject: Re: [gridengine users] qsub -V doesn't set $PATH
CAUTION: This email was received from an External Source
-V strips out PATH and LD_LIBRARY_PATH for security reasons, since prolog
and epilog scripts run with the submission environment but possibly in the
context of a different user (i.e. a user could point a root-running prolog
script at compromised binaries or C library).
On Mon, Jan 20, 2020 at 10:12:09PM +0000, Shiel, Adam wrote:
> Hi,
>
> I inherited maintaining a small cluster running SGE 8.1.8. I've been away
> from grid engine for a while and am seeing behavior I don't remember from our
> 6.X something system.
>
> On our new cluster a
>
> qsub -V ${other_options_omitted} ./my_command
>
> doesn't set $PATH on the remote job. Is that expected behavior?
>
> Thanks -
> Adam Shiel
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--
-- Skylar Thompson ([email protected]<mailto:[email protected]>)
-- Genome Sciences Department, System Administrator
-- Foege Building S046, (206)-685-7354
-- University of Washington School of Medicine
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