# Fuseki configuration for BDRC, configures two endpoints:
# - /bdrc is read-only
# - /bdrcrw is read-write
#
# This was painful to come up with but the web interface basically
allows no option
# and there is no subclass inference by default so such a
configuration file is necessary.
#
# The main doc sources are:
# -
https://jena.apache.org/documentation/fuseki2/fuseki-configuration.html
# -
https://jena.apache.org/documentation/assembler/assembler-howto.html
# - https://jena.apache.org/documentation/assembler/assembler.ttl
#
# See
https://jena.apache.org/documentation/fuseki2/fuseki-layout.html
for the destination of this file.
@prefix fuseki: <http://jena.apache.org/fuseki#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix tdb: <http://jena.hpl.hp.com/2008/tdb#> .
@prefix ja: <http://jena.hpl.hp.com/2005/11/Assembler#> .
@prefix text: <http://jena.apache.org/text#> .
@prefix skos: <http://www.w3.org/2004/02/skos/core#> .
@prefix : <http://base/#> .
[] rdf:type fuseki:Server ;
fuseki:services (
:text_svc
) .
:text_svc rdf:type fuseki:Service ;
fuseki:name "text_svc" ; # name of
the dataset in the url
fuseki:serviceQuery "query" ; # SPARQL query
service
fuseki:serviceUpdate "update" ; # SPARQL
update service
fuseki:serviceUpload "upload" ; # Non-SPARQL
upload service
fuseki:serviceReadWriteGraphStore "data" ; # SPARQL Graph
store protocol (read and write)
fuseki:dataset :text_dataset ;
.
:text_dataset rdf:type text:TextDataset ;
text:dataset :tdb_dataset ;
text:index :lucene_index ;
.
# using TDB
:tdb_dataset rdf:type tdb:DatasetTDB ;
tdb:location
"/home/text/tools/apache-jena-fuseki-3.9.0/run/tdb_dataset" ;
tdb:unionDefaultGraph true ;
.
# Text index description
:lucene_index a text:TextIndexLucene ;
text:directory
<file:/home/text/tools/apache-jena-fuseki-3.9.0/run/lucene_index> ;
text:storeValues true ;
text:entityMap :entitymap ;
.
# Index mappings
:entitymap a text:EntityMap ;
text:entityField "uri" ;
text:uidField "uid" ;
text:defaultField "label" ;
text:langField "lang" ;
text:graphField "graph" ; ## enable graph-specific
indexing
text:map (
[ text:field "label" ;
text:predicate skos:prefLabel ]
) ;
.
On Jan 21, 2019, at 5:21 AM, Mikael Pesonen
<mikael.peso...@lingsoft.fi> wrote:
Hi,
On 18/01/2019 18:13, Chris Tomlinson wrote:
Hi,
1) If you’re using a default config, it does not have a working
jena-text configuration. The config will need to include
skos:prefLabel in the entity map.
2) when you change the jena-text in significant ways, such as
changing what analyzer is used for a given property and so on,
then you’ll need to rebuild the Lucene index via reloading the
dataset or using the textIndexer
<https://jena.apache.org/documentation/query/text-query.html#building-a-text-index>.
I don’t recall this being mentioned as part of your testing
3) Please indicate exactly which item you’re using
jena-fuseki-war-3.9.0.war or jena-fuseki-webapp-3.9.0.jar etc,
and the config file itself. The error you’ve mentioned previously:
We are running Fuseki as service
-----
[Unit]
Description=Apache Jena Fuseki
[Service]
Type=simple
User=fuseki
#Environment=JAVA_HOME=/usr/lib/jvm/java-8-oracle/
Environment=FUSEKI_HOME=/home/text/tools/apache-jena-fuseki-3.9.0
Environment=FUSEKI_BASE=/home/text/tools/apache-jena-fuseki-3.9.0/run
ExecStart=/usr/bin/java
-Dlog4j.configuration=file:/home/text/tools/apache-jena-fuseki-3.9.0/log4j.properties
-Xmx5600M -jar
/home/text/tools/apache-jena-fuseki-3.9.0/fuseki-server.jar
--update --port 3030 --loc=/home/text/tools/jena_data_test/ /ds
[Install]
WantedBy=multi-user.target
-----
All settings are default otherwise, we haven't changed any config
file.
Are there some minimal settings to this example config so that I
could get skos:prefLabel working?
https://jena.apache.org/documentation/query/text-query.html#configuration
So when we have a working configuration/assembler file, all is
needed is to build the index
java -cp $FUSEKI_HOME/fuseki-server.jar jena.textindexer
--desc=assembler_file ?
Thank everyone for the help
Jan 17 17:00:28 semantic-dev java[16800]: [2019-01-17 17:00:28]
Config INFO Load configuration:
file:///home/text/tools/apache-jena-fuseki-3.9.0/run/configuration/text_index.ttl
<file:///home/text/tools/apache-jena-fuseki-3.9.0/run/configuration/text_index.ttl>
Jan 17 17:00:28 semantic-dev java[16800]: [2019-01-17 17:00:28]
WebAppContext WARN Failed startup of context
o.e.j.w.WebAppContext@4159e81b{Apache Jena Fuseki
Server,/,file:///home/text/tools/apache-jena-fuseki-3.9.0/webapp/,UNAVAILABLE
<file:///home/text/tools/apache-jena-fuseki-3.9.0/webapp/,UNAVAILABLE>}
Jan 17 17:00:28 semantic-dev java[16800]: at
org.apache.jena.fuseki.build.FusekiConfig.readAssemblerFile(FusekiConfig.java:148)
suggests to me that something in the config file is confusing the
readAssemblerFile. It doesn’t look like it’s failing in the
reading the jena-text portion of the config.
If http://api.finto.fi/download/mesh/mesh-skos.ttl
<http://api.finto.fi/download/mesh/mesh-skos.ttl> the dataset,
then can you cut it down to just a small test case with some
concepts with “medi” and a few without? That along with the other
information should help move this further along..
4) Your query:
PREFIX skos: <http://www.w3.org/2004/02/skos/core#
<http://www.w3.org/2004/02/skos/core#>>
PREFIX text: <http://jena.apache.org/text#
<http://jena.apache.org/text#>>
SELECT *
WHERE
{
GRAPH <http://www.yso.fi/onto/mesh/
<http://www.yso.fi/onto/mesh/>>
{
?concept text:query (skos:prefLabel "medi") .
?concept skos:prefLabel ?prefLabel .
# FILTER ( REGEX(?prefLabel, "\\bmedi", "i"))
}
}
limit 10
might effectively just be executing:
?concept skos:prefLabel ?prefLabel .
if there is actually no jena-text config - I haven’t checked what
happens when there is no TextIndex configured and the text:query
is invoked, but may be a noop
Thanks,
Chris
On Jan 18, 2019, at 8:08 AM, Mikael Pesonen
<mikael.peso...@lingsoft.fi> wrote:
On 18/01/2019 13:40, Andy Seaborne wrote:
On 17/01/2019 15:45, Mikael Pesonen wrote:
On 17/01/2019 17:38, Andy Seaborne wrote:
On 17/01/2019 12:51, Mikael Pesonen wrote:
On 17/01/2019 13:58, Andy Seaborne wrote:
On 16/01/2019 12:50, Mikael Pesonen wrote:
Hi,
I'm trying to get text search work. Sparql REGEX takes few
seconds to finish so hoping this would be faster.
Application is term search using SKOS ontology.
First tested if it's enabled by default
?concept text:query (skos:prefLabel "medi") .
?concept skos:prefLabel ?prefLabel
That returns all concepts so I guess it's not enabled.
If it returns all concepts, the first line matched
(otherwise you get none). If so, there is a text index and
"medi" (case insensitive) matches Lucene rules, everything.
What does this mean then, why is it matching everything?
If zero matches, you don't get to ?concept skos:prefLabel
?prefLabel (if the text index is correct)
The query above, if the index is setup correctly, gets all
concepts where any skos:prefLabel matches "medi" (not just at
the start), then gets all skos:prefLabel for those concepts.
That does not mean ?prefLabel only matches "medi"
:c skos:prefLabel "medi" ;
skos:prefLabel "Other" .
will return 2 matches including ?prefLabel="Other"
Yes that is how I understood it. But ?concept text:query
(skos:prefLabel "medi") returns all concepts, also those that
don't have any label having "medi".
Then I don't understand what is going on.
Do you have a complete, minimal example that someone can use to
recreate the situation?
This is the query:
PREFIX skos: <http://www.w3.org/2004/02/skos/core#>
PREFIX text: <http://jena.apache.org/text#>
SELECT *
WHERE
{
GRAPH <http://www.yso.fi/onto/mesh/>
{
?concept text:query (skos:prefLabel "medi") .
?concept skos:prefLabel ?prefLabel .
# FILTER ( REGEX(?prefLabel, "\\bmedi", "i"))
}
}
limit 10
and graph is dump copied from here: https://finto.fi/mesh/en/
end of page "Download this vocabulary"
So to make clear, we have made zero configuration on
jena/fuseki, all is default from 3.9.0 package.
Andy
--
Lingsoft - 30 years of Leading Language Management
www.lingsoft.fi
Speech Applications - Language Management - Translation -
Reader's and Writer's Tools - Text Tools - E-books and M-books
Mikael Pesonen
System Engineer
e-mail: mikael.peso...@lingsoft.fi
Tel. +358 2 279 3300
Time zone: GMT+2
Helsinki Office
Eteläranta 10
FI-00130 Helsinki
FINLAND
Turku Office
Kauppiaskatu 5 A
FI-20100 Turku
FINLAND
--
Lingsoft - 30 years of Leading Language Management
www.lingsoft.fi
Speech Applications - Language Management - Translation - Reader's
and Writer's Tools - Text Tools - E-books and M-books
Mikael Pesonen
System Engineer
e-mail: mikael.peso...@lingsoft.fi
Tel. +358 2 279 3300
Time zone: GMT+2
Helsinki Office
Eteläranta 10
FI-00130 Helsinki
FINLAND
Turku Office
Kauppiaskatu 5 A
FI-20100 Turku
FINLAND
