I assume
- that you don't use Fedora elder than 25 any more'
- you don't need aged log messages any more
- PackageKit re-creates it's directory under /var/cache during each run as dnf
does
then:
sudo rm -rf /var/log/journal/*/*;
sudo systemctl kill --signal=SIGUSR2 systemd-journald;
sudo rm -rf /var/cache/{dnf,mock,yum,system-upgrade,PackageKit};
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