Can you run simple MPI applications, like sending a message around in a ring?
On Dec 9, 2009, at 10:18 AM, Andrew McBride wrote: > Thanks for your quick response Ralph. > > The errors I get is now are of a completely different nature and have to do > with, presumably, calling delete on an unallocated pointer. Now, this > probably has little to do with openmpi and more to do with compilers used to > create openmpi? > > I used gcc version 4.5.0 20090910 when compiling openmpi. > > Does anyone have any ideas? > > Regards > Andrew > > Start testing: Dec 09 15:53 SAST > ---------------------------------------------------------- > 1/534 Testing: Teuchos_BLAS_test_MPI_1 > 1/534 Test: Teuchos_BLAS_test_MPI_1 > Command: "/Users/andrewmcbride/lib/openmpi-1.3.3/MAC/bin/mpiexec" "-np" "1" > "/Users/andrewmcbride/lib/trilinos-10.0.2-Source/MAC_SL/packages/teuchos/test/BLAS/Teuchos_BLAS_test.exe" > "-v" > Directory: > /Users/andrewmcbride/lib/trilinos-10.0.2-Source/MAC_SL/packages/teuchos/test/BLAS > "Teuchos_BLAS_test_MPI_1" start time: Dec 09 15:53 SAST > Output: > ---------------------------------------------------------- > Teuchos_BLAS_test.exe(72504) malloc: *** error for object 0x100727c00: > pointer being freed was not allocated > *** set a breakpoint in malloc_error_break to debug > [macs-mac:72504] *** Process received signal *** > [macs-mac:72504] Signal: Abort trap (6) > > On 09 Dec 2009, at 3:32 PM, Ralph Castain wrote: > >> You need to set your LD_LIBRARY_PATH to ~/lib/openmpi-1.3.3/MAC/lib, and >> your PATH to ~/lib/openmpi-1.3.3/MAC/bin >> >> It should then run fine. >> >> On Wed, Dec 9, 2009 at 6:29 AM, Andrew McBride <andrew.mcbr...@uct.ac.za> >> wrote: >> Hi >> >> I've installed trilinos using the openmpi 1.3.3 libraries. I'm configuring >> openmpi as follows: >> /configure CXX=/usr/local/bin/g++ CC=/usr/local/bin/gcc >> F77=/usr/local/bin/gfortran - >> prefix=/Users/andrewmcbride/lib/openmpi-1.3.3/MAC >> >> Trilinos compiles without problem but the test fail (see below). I'm running >> a Mac with OSX10.6 (snow leopard). The mpi tests seem to run fine: >> >> bash-3.2$ ~/lib/openmpi-1.3.3/MAC/bin/mpicc hello_c.c >> bash-3.2$ ~/lib/openmpi-1.3.3/MAC/bin/mpirun -np 2 hello_ >> bash-3.2$ ~/lib/openmpi-1.3.3/MAC/bin/mpirun -np 2 a.out >> Hello, world, I am 0 of 2 >> Hello, world, I am 1 of 2 >> >> I'm convinced that the problem has to do with the paths and different >> versions of mpi lurking on the mac. I don't want to use the version of >> openmpi that comes bundled with the mac for a different reason. >> >> Any help would be most appreciated >> >> Andrew >> >> >> Start testing: Dec 09 12:18 SAST >> ---------------------------------------------------------- >> 1/534 Testing: Teuchos_BLAS_test_MPI_1 >> 1/534 Test: Teuchos_BLAS_test_MPI_1 >> Command: "/Users/andrewmcbride/lib/openmpi-1.3.3/MAC/bin/mpiexec" "-np" "1" >> "/Users/andrewmcbride/lib/trilinos-10.0.2-Source/MAC_SL/packages/teuchos/test/BLAS/Teuchos_BLAS_test.exe" >> "-v" >> Directory: >> /Users/andrewmcbride/lib/trilinos-10.0.2-Source/MAC_SL/packages/teuchos/test/BLAS >> "Teuchos_BLAS_test_MPI_1" start time: Dec 09 12:18 SAST >> Output: >> ---------------------------------------------------------- >> [macs-mac.local:71058] [[INVALID],INVALID] ORTE_ERROR_LOG: Not found in file >> runtime/orte_init.c at line 125 >> -------------------------------------------------------------------------- >> It looks like orte_init failed for some reason; your parallel process is >> likely to abort. There are many reasons that a parallel process can >> fail during orte_init; some of which are due to configuration or >> environment problems. This failure appears to be an internal failure; >> here's some additional information (which may only be relevant to an >> Open MPI developer): >> >> orte_ess_base_select failed >> --> Returned value Not found (-13) instead of ORTE_SUCCESS >> -------------------------------------------------------------------------- >> *** An error occurred in MPI_Init >> *** before MPI was initialized >> *** MPI_ERRORS_ARE_FATAL (your MPI job will now abort) >> [macs-mac.local:71058] Abort before MPI_INIT completed successfully; not >> able to guarantee that all other processes were killed! >> -------------------------------------------------------------------------- >> >> >> _______________________________________________ >> users mailing list >> us...@open-mpi.org >> http://www.open-mpi.org/mailman/listinfo.cgi/users >> >> _______________________________________________ >> users mailing list >> us...@open-mpi.org >> http://www.open-mpi.org/mailman/listinfo.cgi/users > > _______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users -- Jeff Squyres jsquy...@cisco.com
