I'm a afraid I don't know anything about OpenFoam, but it looks like it deliberately chose to abort due to some error (i.e., it then called MPI_ABORT to abort).
I don't know what those stack traces mean; you will likely have better luck asking your question on the OpenFoam support list. Good luck! On Jun 11, 2010, at 5:03 AM, <asmae.elbahlo...@mpsa.com> wrote: > hello, > i'm doing a tutorial on OpenFoam, but when i run in parallel by typing > "mpirun -np 30 foamProMesh -parallel | tee 2>&1 log/FPM.log" > On the terminal window , after fews seconds of run, it iterate but i have at > the end: > > > tta201@linux-qv31:/media/OpenFoam/Travaux/F1car_asmaetest> mpirun -np 30 > -machinefile machinefile foamProMesh -parallel | tee 2>&1 log/FPM.log > /*---------------------------------------------------------------------------*\ > > | | > | > | F ield | FOAM: The Open Source CFD Toolbox > | > | O peration | Version: 1.5-2.2 > | > | A nd | Web: http://www.iconcfd.com > | > | M anipulation | > | > \*---------------------------------------------------------------------------*/ > > Exec : foamProMesh -parallel > > Date : Jun 11 2010 > > Time : 10:42:24 > > Host : Foam1 > > PID : 9789 > > Case : /media/OpenFoam/Travaux/F1car_asmaetest > > nProcs : 30 > > Slaves : > > 29 > > ( > > Foam1.9790 > > Foam1.9791 > > Foam1.9792 > > Foam2.9224 > > Foam2.9225 > > Foam2.9226 > > Foam2.9227 > > Foam3.8925 > > Foam3.8926 > > Foam3.8927 > > ...... > > Added patches in = 0 s > > Selecting decompositionMethod hierarchical > > Overall mesh bounding box : (-5.60160988792 -5.00165616875 -0.259253998544) > (9.39931715541 5.00165616875 5.74982363461) > Relative tolerance : 1e-06 > > Absolute matching distance : 1.90053435613e-05 > > > > Determining initial surface intersections > ----------------------------------------- > > [1] > [1] > [1] Face 42832 is in zone 5, its coupled face is in zone -1#0 > Foam::error::printStack(Foam::Ostream&) in > "/media/OpenFoam/FOAMpro/FOAMpro-1.5-2.2/FOAM-1.5-2.2/lib/linux64GccDPOpt/libFOAM.so" > #1 Foam::error::abort() in > "/media/OpenFoam/FOAMpro/FOAMpro-1.5-2.2/FOAM-1.5-2.2/lib/linux64GccDPOpt/libFOAM.so" > #2 Foam::meshRefinement::checkCoupledFaceZones(Foam::polyMesh const&) in > "/media/OpenFoam/FOAMpro/FOAMpro-1.5-2.2/FOAM-1.5-2.2/lib/linux64GccDPOpt/libautoMesh.so" > #3 main in > "/media/OpenFoam/FOAMpro/FOAMpro-1.5-2.2/FOAM-1.5-2.2/applications/bin/linux64GccDPOpt/foamProMesh" > #4 __libc_start_main in "/lib64/libc.so.6" > #5 __gxx_personality_v0 at > /usr/src/packages/BUILD/glibc-2.3/csu/../sysdeps/x86_64/elf/start.S:116 > [1] > [1] > [1] From function meshRefinement::checkCoupledFaceZones(const polyMesh&) > [1] in file autoHexMesh/meshRefinement/meshRefinement.C at line 1180. > [1] > FOAM parallel run aborting > [1] > -------------------------------------------------------------------------- > MPI_ABORT was invoked on rank 1 in communicator MPI_COMM_WORLD > with errorcode 1. > > NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. > You may or may not see output from other processes, depending on > exactly when Open MPI kills them. > -------------------------------------------------------------------------- > [11] > [11] > [11] Face 42862 is in zone -1, its coupled face is in zone 5#0 > Foam::error::printStack(Foam::Ostream&) in > "/media/OpenFoam/FOAMpro/FOAMpro-1.5-2.2/FOAM-1.5-2.2/lib/linux64GccDPOpt/libFOAM.so" > #1 Foam::error::abort() in > "/media/OpenFoam/FOAMpro/FOAMpro-1.5-2.2/FOAM-1.5-2.2/lib/linux64GccDPOpt/libFOAM.so" > #2 Foam::meshRefinement::checkCoupledFaceZones(Foam::polyMesh const&) in > "/media/OpenFoam/FOAMpro/FOAMpro-1.5-2.2/FOAM-1.5-2.2/lib/linux64GccDPOpt/libautoMesh.so" > #3 main in > "/media/OpenFoam/FOAMpro/FOAMpro-1.5-2.2/FOAM-1.5-2.2/applications/bin/linux64GccDPOpt/foamProMesh" > #4 __libc_start_main in "/lib64/libc.so.6" > #5 __gxx_personality_v0 at > /usr/src/packages/BUILD/glibc-2.3/csu/../sysdeps/x86_64/elf/start.S:116 > [11] > [11] > [11] From function meshRefinement::checkCoupledFaceZones(const polyMesh&) > [11] in file autoHexMesh/meshRefinement/meshRefinement.C at line 1180. > [11] > FOAM parallel run aborting > [11] > [8] > [8] > [8] Face 41663 is in zone -1, its coupled face is in zone 5#0 > Foam::error::printStack(Foam::Ostream&) in > "/media/OpenFoam/FOAMpro/FOAMpro-1.5-2.2/FOAM-1.5-2.2/lib/linux64GccDPOpt/libFOAM.so" > #1 Foam::error::abort() in > "/media/OpenFoam/FOAMpro/FOAMpro-1.5-2.2/FOAM-1.5-2.2/lib/linux64GccDPOpt/libFOAM.so" > #2 Foam::meshRefinement::checkCoupledFaceZones(Foam::polyMesh const&) in > "/media/OpenFoam/FOAMpro/FOAMpro-1.5-2.2/FOAM-1.5-2.2/lib/linux64GccDPOpt/libautoMesh.so" > #3 main in > "/media/OpenFoam/FOAMpro/FOAMpro-1.5-2.2/FOAM-1.5-2.2/applications/bin/linux64GccDPOpt/foamProMesh" > #4 __libc_start_main in "/lib64/libc.so.6" > #5 __gxx_personality_v0 at > /usr/src/packages/BUILD/glibc-2.3/csu/../sysdeps/x86_64/elf/start.S:116 > [8] > [8] > [8] From function meshRefinement::checkCoupledFaceZones(const polyMesh&) > [8] in file autoHexMesh/meshRefinement/meshRefinement.C at line 1180. > [8] > FOAM parallel run aborting > [8] > -------------------------------------------------------------------------- > mpirun has exited due to process rank 1 with PID 9790 on > node 10.0.0.1 exiting without calling "finalize". This may > have caused other processes in the application to be > terminated by signals sent by mpirun (as reported here). > -------------------------------------------------------------------------- > [linux-qv31:16344] 2 more processes have sent help message help-mpi-api.txt / > mpi-abort > [linux-qv31:16344] Set MCA parameter "orte_base_help_aggregate" to 0 to see > all help / error messages > > _______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users -- Jeff Squyres jsquy...@cisco.com For corporate legal information go to: http://www.cisco.com/web/about/doing_business/legal/cri/
