Hi Xianjun
Suggestions/Questions:
1) Did you check if malloc returns a non-NULL pointer?
Your program is assuming this, but it may not be true,
and in this case the problem is not with MPI.
You can print a message and call MPI_Abort if it doesn't.
2) Have you tried MPI_Isend/MPI_Irecv?
Or perhaps the buffered cousin MPI_Ibsend?
3) Why do you want to send these huge messages?
Wouldn't it be less of a trouble to send several
smaller messages?
I hope it helps,
Gus Correa
Xianjun wrote:
Hi
Are you running on two processes (mpiexec -n 2)?
Yes
Have you tried to print Gsize?
Yes, I had checked my codes several times, and I thought the errors came
from the OpenMpi. :)
The command line I used:
"mpirun -hostfile ./Serverlist -np 2 ./test". The "Serverlist" file
include several computers in my network.
The command line that I used to build the openmpi-1.4.1:
./configure --enable-debug --prefix=/usr/work/openmpi ; make all install;
What interconnect do you use?
It is normal TCP/IP interconnect with 1GB network card. when I debugged
my codes(and the openmpi codes), I found the openMpi do call the
"mca_pml_ob1_send_request_start_rdma(...)" function, but I was not quite
sure which protocal was used when transfer 2BG data. Do you have any
opinions? Thanks
Best Regards
Xianjun Meng
2010/12/7 Gus Correa <g...@ldeo.columbia.edu <mailto:g...@ldeo.columbia.edu>>
Hi Xianjun
Are you running on two processes (mpiexec -n 2)?
I think this code will deadlock for more than two processes.
The MPI_Recv won't have a matching send for rank>1.
Also, this is C, not MPI,
but you may be wrapping into the negative numbers.
Have you tried to print Gsize?
It is probably -2147483648 in 32bit and 64bit machines.
My two cents.
Gus Correa
Mike Dubman wrote:
Hi,
What interconnect and command line do you use? For InfiniBand
openib component there is a known issue with large transfers (2GB)
https://svn.open-mpi.org/trac/ompi/ticket/2623
try disabling memory pinning:
http://www.open-mpi.org/faq/?category=openfabrics#large-message-leave-pinned
regards
M
2010/12/6 <xjun.m...@gmail.com <mailto:xjun.m...@gmail.com>
<mailto:xjun.m...@gmail.com <mailto:xjun.m...@gmail.com>>>
hi,
In my computers(X86-64), the sizeof(int)=4, but the
sizeof(long)=sizeof(double)=sizeof(size_t)=8. when I checked my
mpi.h file, I found that the definition about the sizeof(int) is
correct. meanwhile, I think the mpi.h file was generated
according
to my compute environment when I compiled the Openmpi. So, my
codes
still don't work. :(
Further, I found when I called the collective routines(such as,
MPI_Allgatherv(...)) which are implemented by the Point 2 Point
don't work either when the data > 2GB.
Thanks
Xianjun
2010/12/6 Tim Prince <n...@aol.com <mailto:n...@aol.com>
<mailto:n...@aol.com <mailto:n...@aol.com>>>
On 12/5/2010 7:13 PM, Xianjun wrote:
hi,
I met a question recently when I tested the MPI_send and
MPI_Recv
functions. When I run the following codes, the processes
hanged and I
found there was not data transmission in my network
at all.
BTW: I finished this test on two X86-64 computers
with 16GB
memory and
installed Linux.
1 #include <stdio.h>
2 #include <mpi.h>
3 #include <stdlib.h>
4 #include <unistd.h>
5
6
7 int main(int argc, char** argv)
8 {
9 int localID;
10 int numOfPros;
11 size_t Gsize = (size_t)2 * 1024 * 1024 * 1024;
12
13 char* g = (char*)malloc(Gsize);
14
15 MPI_Init(&argc, &argv);
16 MPI_Comm_size(MPI_COMM_WORLD, &numOfPros);
17 MPI_Comm_rank(MPI_COMM_WORLD, &localID);
18
19 MPI_Datatype MPI_Type_lkchar;
20 MPI_Type_contiguous(2048, MPI_BYTE, &MPI_Type_lkchar);
21 MPI_Type_commit(&MPI_Type_lkchar);
22
23 if (localID == 0)
24 {
25 MPI_Send(g, 1024*1024, MPI_Type_lkchar, 1, 1,
MPI_COMM_WORLD);
26 }
27
28 if (localID != 0)
29 {
30 MPI_Status status;
31 MPI_Recv(g, 1024*1024, MPI_Type_lkchar, 0, 1, \
32 MPI_COMM_WORLD, &status);
33 }
34
35 MPI_Finalize();
36
37 return 0;
38 }
You supplied all your constants as 32-bit signed data,
so, even
if the count for MPI_Send() and MPI_Recv() were a larger data
type, you would see this limit. Did you look at your
<mpi.h> ?
-- Tim Prince
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