Hello
I try to compile open-mpi with ifort 12.0.4. My system is ubuntu
lucid. Previous intallation with ifort 11.1 was fine.
configure and make all seems to work well, but make install report an error:
libtool: line 7847: icc: command not found
libtool: install: error: relink `lipopen-rte.la' with the above
command before installing it
I want to underline that icc is a knom command for bash.
I have check the FAQ and it seems to me that the problem is more like
the one report for IBM compiler. So I try with
configure CC=icc CXX=icpc F77=ifort FC=ifort --disable-shared --enable-static
Now the install finish without error, but when I try to run mpi I have
error message:
No available pml components were found
This mean ......
....
PML ob1 cannot be selected
The output of ompi_info is:
Package: Open MPI user@CAPYS Distribution
Open MPI: 1.4.3
Open MPI SVN revision: r23834
Open MPI release date: Oct 05, 2010
Open RTE: 1.4.3
Open RTE SVN revision: r23834
Open RTE release date: Oct 05, 2010
OPAL: 1.4.3
OPAL SVN revision: r23834
OPAL release date: Oct 05, 2010
Ident string: 1.4.3
Prefix: /usr/local
Configured architecture: x86_64-unknown-linux-gnu
Configure host: CAPYS
Configured by: user
Configured on: Mon Jun 6 11:00:10 CEST 2011
Configure host: CAPYS
Built by: user
Built on: lundi 6 juin 2011, 11:03:21 (UTC+0200)
Built host: CAPYS
C bindings: yes
C++ bindings: yes
Fortran77 bindings: yes (all)
Fortran90 bindings: yes
Fortran90 bindings size: small
C compiler: icc
C compiler absolute: /opt/intel/composerxe-2011.4.191/bin/intel64/icc
C++ compiler: icpc
C++ compiler absolute: /opt/intel/composerxe-2011.4.191/bin/intel64/icpc
Fortran77 compiler: ifort
Fortran77 compiler abs: /opt/intel/composerxe-2011.4.191/bin/intel64/ifort
Fortran90 compiler: ifort
Fortran90 compiler abs: /opt/intel/composerxe-2011.4.191/bin/intel64/ifort
C profiling: yes
C++ profiling: yes
Fortran77 profiling: yes
Fortran90 profiling: yes
C++ exceptions: no
Thread support: posix (mpi: no, progress: no)
Sparse Groups: no
Internal debug support: no
MPI parameter check: runtime
Memory profiling support: no
Memory debugging support: no
libltdl support: yes
Heterogeneous support: no
mpirun default --prefix: no
MPI I/O support: yes
MPI_WTIME support: gettimeofday
Symbol visibility support: yes
FT Checkpoint support: no (checkpoint thread: no)
MCA backtrace: execinfo (MCA v2.0, API v2.0, Component v1.4.3)
MCA memory: ptmalloc2 (MCA v2.0, API v2.0, Component v1.4.3)
MCA paffinity: linux (MCA v2.0, API v2.0, Component v1.4.3)
MCA carto: auto_detect (MCA v2.0, API v2.0, Component v1.4.3)
MCA carto: file (MCA v2.0, API v2.0, Component v1.4.3)
MCA maffinity: first_use (MCA v2.0, API v2.0, Component v1.4.3)
MCA timer: linux (MCA v2.0, API v2.0, Component v1.4.3)
MCA installdirs: env (MCA v2.0, API v2.0, Component v1.4.3)
MCA installdirs: config (MCA v2.0, API v2.0, Component v1.4.3)
MCA dpm: orte (MCA v2.0, API v2.0, Component v1.4.3)
MCA pubsub: orte (MCA v2.0, API v2.0, Component v1.4.3)
MCA allocator: basic (MCA v2.0, API v2.0, Component v1.4.3)
MCA allocator: bucket (MCA v2.0, API v2.0, Component v1.4.3)
MCA coll: basic (MCA v2.0, API v2.0, Component v1.4.3)
MCA coll: hierarch (MCA v2.0, API v2.0, Component v1.4.3)
MCA coll: inter (MCA v2.0, API v2.0, Component v1.4.3)
MCA coll: self (MCA v2.0, API v2.0, Component v1.4.3)
MCA coll: sm (MCA v2.0, API v2.0, Component v1.4.3)
MCA coll: sync (MCA v2.0, API v2.0, Component v1.4.3)
MCA coll: tuned (MCA v2.0, API v2.0, Component v1.4.3)
MCA io: romio (MCA v2.0, API v2.0, Component v1.4.3)
MCA mpool: fake (MCA v2.0, API v2.0, Component v1.4.3)
MCA mpool: rdma (MCA v2.0, API v2.0, Component v1.4.3)
MCA mpool: sm (MCA v2.0, API v2.0, Component v1.4.3)
MCA pml: cm (MCA v2.0, API v2.0, Component v1.4.3)
MCA pml: csum (MCA v2.0, API v2.0, Component v1.4.3)
MCA pml: ob1 (MCA v2.0, API v2.0, Component v1.4.3)
MCA pml: v (MCA v2.0, API v2.0, Component v1.4.3)
MCA bml: r2 (MCA v2.0, API v2.0, Component v1.4.3)
MCA rcache: vma (MCA v2.0, API v2.0, Component v1.4.3)
MCA btl: self (MCA v2.0, API v2.0, Component v1.4.3)
MCA btl: sm (MCA v2.0, API v2.0, Component v1.4.3)
MCA btl: tcp (MCA v2.0, API v2.0, Component v1.4.3)
MCA topo: unity (MCA v2.0, API v2.0, Component v1.4.3)
MCA osc: pt2pt (MCA v2.0, API v2.0, Component v1.4.3)
MCA osc: rdma (MCA v2.0, API v2.0, Component v1.4.3)
MCA iof: hnp (MCA v2.0, API v2.0, Component v1.4.3)
MCA iof: orted (MCA v2.0, API v2.0, Component v1.4.3)
MCA iof: tool (MCA v2.0, API v2.0, Component v1.4.3)
MCA oob: tcp (MCA v2.0, API v2.0, Component v1.4.3)
MCA odls: default (MCA v2.0, API v2.0, Component v1.4.3)
MCA ras: slurm (MCA v2.0, API v2.0, Component v1.4.3)
MCA rmaps: load_balance (MCA v2.0, API v2.0, Component v1.4.3)
MCA rmaps: rank_file (MCA v2.0, API v2.0, Component v1.4.3)
MCA rmaps: round_robin (MCA v2.0, API v2.0, Component v1.4.3)
MCA rmaps: seq (MCA v2.0, API v2.0, Component v1.4.3)
MCA rml: oob (MCA v2.0, API v2.0, Component v1.4.3)
MCA routed: binomial (MCA v2.0, API v2.0, Component v1.4.3)
MCA routed: direct (MCA v2.0, API v2.0, Component v1.4.3)
MCA routed: linear (MCA v2.0, API v2.0, Component v1.4.3)
MCA plm: rsh (MCA v2.0, API v2.0, Component v1.4.3)
MCA plm: slurm (MCA v2.0, API v2.0, Component v1.4.3)
MCA filem: rsh (MCA v2.0, API v2.0, Component v1.4.3)
MCA errmgr: default (MCA v2.0, API v2.0, Component v1.4.3)
MCA ess: env (MCA v2.0, API v2.0, Component v1.4.3)
MCA ess: hnp (MCA v2.0, API v2.0, Component v1.4.3)
MCA ess: singleton (MCA v2.0, API v2.0, Component v1.4.3)
MCA ess: slurm (MCA v2.0, API v2.0, Component v1.4.3)
MCA ess: tool (MCA v2.0, API v2.0, Component v1.4.3)
MCA grpcomm: bad (MCA v2.0, API v2.0, Component v1.4.3)
MCA grpcomm: basic (MCA v2.0, API v2.0, Component v1.4.3)
