yes, I did a full autogen, configure, make clean and make all
On Thu, Mar 1, 2012 at 10:03 PM, Jeffrey Squyres <jsquy...@cisco.com> wrote: > Did you do a full autogen / configure / make clean / make all ? > > > On Mar 1, 2012, at 8:53 AM, Abhinav Sarje wrote: > >> Thanks Ralph. That did help, but only till the next hurdle. Now the >> build fails at the following point with an 'undefined reference': >> ----------- >> Making all in tools/ompi_info >> make[2]: Entering directory >> `/global/u1/a/asarje/hopper/openmpi-dev-trunk/build/ompi/tools/ompi_info' >> CC ompi_info.o >> CC output.o >> CC param.o >> CC components.o >> CC version.o >> CCLD ompi_info >> ../../../ompi/.libs/libmpi.so: undefined reference to `opal_atomic_swap_64' >> make[2]: *** [ompi_info] Error 2 >> make[2]: Leaving directory >> `/global/u1/a/asarje/hopper/openmpi-dev-trunk/build/ompi/tools/ompi_info' >> make[1]: *** [all-recursive] Error 1 >> make[1]: Leaving directory >> `/global/u1/a/asarje/hopper/openmpi-dev-trunk/build/ompi' >> make: *** [all-recursive] Error 1 >> ----------- >> >> >> >> >> >> >> On Thu, Mar 1, 2012 at 5:25 PM, Ralph Castain <r...@open-mpi.org> wrote: >>> You need to update your source code - this was identified and fixed on Wed. >>> Unfortunately, our trunk is a developer's environment. While we try hard to >>> keep it fully functional, bugs do occasionally work their way into the code. >>> >>> On Mar 1, 2012, at 1:37 AM, Abhinav Sarje wrote: >>> >>>> Hi Nathan, >>>> >>>> I tried building on an internal login node, and it did not fail at the >>>> previous point. But, after compiling for a very long time, it failed >>>> while building libmpi.la, with a multiple definition error: >>>> ---------- >>>> ... >>>> CC mpiext/mpiext.lo >>>> CC mpi/f77/base/mpi_f77_base_libmpi_f77_base_la-attr_fn_f.lo >>>> CC >>>> mpi/f77/base/mpi_f77_base_libmpi_f77_base_la-conversion_fn_null_f.lo >>>> CC mpi/f77/base/mpi_f77_base_libmpi_f77_base_la-f90_accessors.lo >>>> CC mpi/f77/base/mpi_f77_base_libmpi_f77_base_la-strings.lo >>>> CC mpi/f77/base/mpi_f77_base_libmpi_f77_base_la-test_constants_f.lo >>>> CCLD mpi/f77/base/libmpi_f77_base.la >>>> CCLD libmpi.la >>>> mca/fcoll/dynamic/.libs/libmca_fcoll_dynamic.a(fcoll_dynamic_file_write_all.o): >>>> In function `local_heap_sort': >>>> /global/u1/a/asarje/hopper/openmpi-dev-trunk/build/ompi/mca/fcoll/dynamic/../../../../../ompi/mca/fcoll/dynamic/fcoll_dynamic_file_write_all.c:1111: >>>> multiple definition of `local_heap_sort' >>>> mca/fcoll/static/.libs/libmca_fcoll_static.a(fcoll_static_file_write_all.o):/global/u1/a/asarje/hopper/openmpi-dev-trunk/build/ompi/mca/fcoll/static/../../../../../ompi/mca/fcoll/static/fcoll_static_file_write_all.c:929: >>>> first defined here >>>> make[2]: *** [libmpi.la] Error 2 >>>> make[2]: Leaving directory >>>> `/global/u1/a/asarje/hopper/openmpi-dev-trunk/build/ompi' >>>> make[1]: *** [all-recursive] Error 1 >>>> make[1]: Leaving directory >>>> `/global/u1/a/asarje/hopper/openmpi-dev-trunk/build/ompi' >>>> make: *** [all-recursive] Error 1 >>>> ---------- >>>> >>>> Any idea why this is happening, and how to fix it? Again, I am using >>>> the XE6 platform configuration file. >>>> >>>> Abhinav. >>>> >>>> On Wed, Feb 29, 2012 at 12:13 AM, Nathan Hjelm <hje...@lanl.gov> wrote: >>>>> >>>>> >>>>> On Mon, 27 Feb 2012, Abhinav Sarje wrote: >>>>> >>>>>> Hi Nathan, Gus, Manju, >>>>>> >>>>>> I got a chance to try out the XE6 support build, but with no success. >>>>>> First I was getting this error: "PGC-F-0010-File write error occurred >>>>>> (temporary pragma .s file)". After searching online about this error, >>>>>> I saw that there is a patch at >>>>>> >>>>>> "https://svn.open-mpi.org/trac/ompi/attachment/ticket/2913/openmpi-trunk-ident_string.patch"; >>>>>> for this particular error. >>>>>> >>>>>> With the patched version, I did not get this error anymore, but got >>>>>> the unknown switch flag error for the flag "-march=amdfam10" >>>>>> (specified in the XE6 configuration in the dev trunk) at a particular >>>>>> point even if I use the '-noswitcherror' flag with the pgcc compiler. >>>>>> >>>>>> If I remove this flag (-march=amdfam10), the build fails later at the >>>>>> following point: >>>>>> ------------------------- >>>>>> Making all in mca/ras/alps >>>>>> make[2]: Entering directory >>>>>> `/{mydir}/openmpi-dev-trunk/build/orte/mca/ras/alps' >>>>>> CC ras_alps_component.lo >>>>>> CC ras_alps_module.lo >>>>>> PGC-F-0206-Can't find include file alps/apInfo.h >>>>>> (../../../../../orte/mca/ras/alps/ras_alps_module.c: 37) >>>>>> PGC/x86-64 Linux 11.10-0: compilation aborted >>>>>> make[2]: *** [ras_alps_module.lo] Error 1 >>>>>> make[2]: Leaving directory >>>>>> `/{mydir}/openmpi-dev-trunk/build/orte/mca/ras/alps' >>>>>> make[1]: *** [all-recursive] Error 1 >>>>>> make[1]: Leaving directory `/{mydir}/openmpi-dev-trunk/build/orte' >>>>>> make: *** [all-recursive] Error 1 >>>>>> -------------------------- >>>>> >>>>> >>>>> This is a known issue with Cray's frontend environment. Build on one of >>>>> the >>>>> internal login nodes. >>>>> >>>>> >>>>> -Nathan >>>>> >>>>> _______________________________________________ >>>>> users mailing list >>>>> us...@open-mpi.org >>>>> http://www.open-mpi.org/mailman/listinfo.cgi/users >>>> >>>> _______________________________________________ >>>> users mailing list >>>> us...@open-mpi.org >>>> http://www.open-mpi.org/mailman/listinfo.cgi/users >>> >>> >>> _______________________________________________ >>> users mailing list >>> us...@open-mpi.org >>> http://www.open-mpi.org/mailman/listinfo.cgi/users >> >> _______________________________________________ >> users mailing list >> us...@open-mpi.org >> http://www.open-mpi.org/mailman/listinfo.cgi/users > > > -- > Jeff Squyres > jsquy...@cisco.com > For corporate legal information go to: > http://www.cisco.com/web/about/doing_business/legal/cri/ > > > _______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users
