Thank you for leading me towards the compiler. I found out that I was trying to compile against version 10.1 instead of 11.0, this fixed my problem to export the right compiler.
Thank you. De bedste hilsner / Best regards, Mads Boye. > -----Original Message----- > From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] > On Behalf Of Jeff Squyres (jsquyres) > Sent: 15. februar 2013 14:52 > To: Open MPI Users > Subject: Re: [OMPI users] Compiling OpenMPI 1.6.3 for Intel Compiler 10.1 > error > > This typically means that your Intel C++ compiler installation is borked. > > Did you look at config.log to see the specific error? Are you able to compile > trivial C++ programs with icpc? > > Please send all the information listed here: > > http://www.open-mpi.org/community/help/ > > > On Feb 15, 2013, at 4:44 AM, Mads Boye <m...@ist.aau.dk> wrote: > > > Hi. > > I am trying to compile OpenMPi for an Intel Compiler. This is causing me > some issues. > > > > Link for config.txt http://homes.ist.aau.dk/mb/config.txt > > > > The ./configure crashes when aligning bool for the C++ compiler: > > ./configure CC=icc CXX=icpc F77=ifort FC=ifort > > --prefix=/pack/openmpi-1.6.3-intel > > ... > > *** C++ compiler and preprocessor > > checking whether we are using the GNU C++ compiler... yes checking > > whether icpc accepts -g... yes checking dependency style of icpc... > > gcc3 checking how to run the C++ preprocessor... /lib/cpp checking for > > the C++ compiler vendor... intel checking if icpc supports > > -finline-functions... yes > > configure: WARNING: -finline-functions has been added to CXXFLAGS > > checking if C and C++ are link compatible... yes checking for C++ > > optimization flags... -O3 -DNDEBUG -finline-functions checking size of > > bool... 0 checking alignment of bool... configure: WARNING: *** > > Problem running configure test! > > configure: WARNING: *** See config.log for details. > > configure: error: *** Cannot continue. > > mb@harald:~/openmpi-1.6.3$ > > > > here is export: > > mb@harald:~/openmpi-1.6.3$ export > > declare -x CPATH="/pack/intel_mkl-10.0.4.023/include" > > declare -x DYLD_LIBRARY_PATH="/pack/ifort-10.1.018/lib:/pack/icc- > 10.1.018/lib" > > declare -x FPATH="/pack/intel_mkl-10.0.4.023/include" > > declare -x HOME="/user/mb" > > declare -x INCLUDE="/pack/intel_mkl-10.0.4.023/include" > > declare -x INTEL_LICENSE_FILE="/pack/icc- > 10.1.018/licenses:/opt/intel/licenses:/user/mb/intel/licenses:/Users/Shared > /Library/Application Support/Intel/Licenses:/pack/ifort- > 10.1.018/licenses:/opt/intel/licenses:/user/mb/intel/licenses:/Users/Shared > /Library/Application Support/Intel/Licenses" > > declare -x LANG="C" > > declare -x LANGUAGE="en_US.UTF-8" > > declare -x LC_ADDRESS="da_DK.UTF-8" > > declare -x LC_ALL="en_US.UTF-8" > > declare -x LC_IDENTIFICATION="da_DK.UTF-8" > > declare -x LC_MEASUREMENT="da_DK.UTF-8" > > declare -x LC_MONETARY="da_DK.UTF-8" > > declare -x LC_NAME="da_DK.UTF-8" > > declare -x LC_NUMERIC="da_DK.UTF-8" > > declare -x LC_PAPER="da_DK.UTF-8" > > declare -x LC_TELEPHONE="da_DK.UTF-8" > > declare -x LC_TIME="da_DK.UTF-8" > > declare -x LD_LIBRARY_PATH="/pack/intel_mkl- > 10.0.4.023/lib/em64t:/pack/ifort-10.1.018/lib:/pack/icc- > 10.1.018/lib:/usr/local/lib:/usr/lib:/lib" > > declare -x LESSCLOSE="/usr/bin/lesspipe %s %s" > > declare -x LESSOPEN="| /usr/bin/lesspipe %s" > > declare -x LIBRARY_PATH="/pack/intel_mkl-10.0.4.023/lib/em64t" > > declare -x LOGNAME="mb" > > declare -x > LS_COLORS="rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd= > 40;33;01:cd=40;33;01:or=40;31;01:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow= > 34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lz > h=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.zip=01;31:*.z=01;31:*.Z=01;3 > 1:*.dz=01;31:*.gz=01;31:*.lz=01;31:*.xz=01;31:*.bz2=01;31:*.bz=01;31:*.tbz= > 01;31:*.tbz2=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.war=0 > 1;31:*.ear=01;31:*.sar=01;31:*.rar=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01; > 31:*.7z=01;31:*.rz=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35: > *.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01 > ;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01; > 35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mk > v=01;35:*.webm=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01; > 35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;3 > 5:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl > =01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.ax > v=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.aac=00;36:*.au=00;36:*.flac > =00;36:*.mid=00;36:*.midi=00;36:*.mka=00;36:*.mp3=00;36:*.mpc=00;36:*. > ogg=00;36:*.ra=00;36:*.wav=00;36:*.axa=00;36:*.oga=00;36:*.spx=00;36:*.x > spf=00;36:" > > declare -x MAIL="/var/mail/mb" > > declare -x MANPATH="/pack/intel_mkl-10.0.4.023/man:/pack/ifort- > 10.1.018/man:/pack/icc-10.1.018/man:/pack/slurm/share/man:/" > > declare -x MKLROOT="/pack/intel_mkl-10.0.4.023" > > declare -x NLSPATH="/pack/ifort-10.1.018/lib/locale/en_US/%N:/pack/icc- > 10.1.018/lib/locale/en_US/%N" > > declare -x OLDPWD="/user/mb" > > declare -x PATH="/pack/ifort-10.1.018/bin:/pack/icc- > 10.1.018/bin:/user/mb/bin:/pack/bin/python:/pack/slurm/bin:/pack/openm > pi-gnu- > ib/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games > " > > declare -x PWD="/user/mb/openmpi-1.6.3" > > declare -x SHELL="/bin/bash" > > declare -x SHLVL="1" > > declare -x SSH_CLIENT="192.168.2.5 37213 22" > > declare -x SSH_CONNECTION="192.168.2.5 37213 192.168.2.6 22" > > declare -x SSH_TTY="/dev/pts/4" > > declare -x TERM="xterm" > > declare -x USER="mb" > > declare -x XDG_SESSION_COOKIE="9ee4b1c561dd60184f7777020000034e- > 1360830861.502044-749903926" > > > > _______________________________________________ > > users mailing list > > us...@open-mpi.org > > http://www.open-mpi.org/mailman/listinfo.cgi/users > > > -- > Jeff Squyres > jsquy...@cisco.com > For corporate legal information go to: > http://www.cisco.com/web/about/doing_business/legal/cri/ > > > _______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users
