Thank you Ralph! I ran it with "-prefix" option but I got this...
[root@host1 tmp]# mpirun -prefix /myname -np 4 -host host2 ./hello.out -------------------------------------------------------------------------- mpirun was unable to launch the specified application as it could not access or execute an executable: Executable: -prefix=/myname Node: host1 while attempting to start process rank 0. -------------------------------------------------------------------------- [root@host1 tmp]# I also updated PATH in the remote host (host2) to include /myname. But it didn't seem change anything... eiichi On Sun, Apr 28, 2013 at 11:48 AM, Ralph Castain <r...@open-mpi.org> wrote: > The problem is likely that your path variables aren't being set properly > on the remote machine when mpirun launches the remote daemon. You might > check to see that your default shell rc file is also setting those values > correctly. Alternatively, modify your mpirun cmd line a bit by adding > > mpirun -prefix /myname ... > > so it will set the remove prefix and see if that helps. If it does, you > can add --enable-orterun-prefix-by-default to your configure line so mpirun > always adds it. > > > On Apr 28, 2013, at 7:56 AM, "E.O." <ooyama.eii...@gmail.com> wrote: > > > Hello > > > > I have five linux machines (one is redhat and the other are busybox) > > I downloaded openmpi-1.6.4.tar.gz into my main redhat machine and > configure'ed/compiled it successfully. > > ./configure --prefix=/myname > > I installed it to /myname directory successfully. I am able to run a > simple hallo.c on my redhat machine. > > > > [root@host1 /tmp] # mpirun -np 4 ./hello.out > > I am parent > > I am a child > > I am a child > > I am a child > > [root@host1 /tmp] # > > > > Then, I sent entire /myname directory to the another machine (host2). > > [root@host1 /] # tar zcf - myname | ssh host2 "(cd /; tar zxf -)" > > > > and ran mpirun for the host (host2). > > > > [root@host1 tmp]# mpirun -np 4 -host host2 ./hello.out > > > -------------------------------------------------------------------------- > > Sorry! You were supposed to get help about: > > opal_init:startup:internal-failure > > But I couldn't open the help file: > > //share/openmpi/help-opal-runtime.txt: No such file or directory. > Sorry! > > > -------------------------------------------------------------------------- > > [host2:26294] [[INVALID],INVALID] ORTE_ERROR_LOG: Error in file > runtime/orte_init.c at line 79 > > [host2:26294] [[INVALID],INVALID] ORTE_ERROR_LOG: Error in file > orted/orted_main.c at line 358 > > > -------------------------------------------------------------------------- > > A daemon (pid 23691) died unexpectedly with status 255 while attempting > > to launch so we are aborting. > > > > There may be more information reported by the environment (see above). > > > > This may be because the daemon was unable to find all the needed shared > > libraries on the remote node. You may set your LD_LIBRARY_PATH to have > the > > location of the shared libraries on the remote nodes and this will > > automatically be forwarded to the remote nodes. > > > -------------------------------------------------------------------------- > > > -------------------------------------------------------------------------- > > mpirun noticed that the job aborted, but has no info as to the process > > that caused that situation. > > > -------------------------------------------------------------------------- > > [root@host1 tmp]# > > > > I set those environment variables > > > > [root@host1 tmp]# echo $LD_LIBRARY_PATH > > /myname/lib/ > > [root@host1 tmp]# echo $OPAL_PREFIX > > /myname/ > > [root@host1 tmp]# > > > > [root@host2 /] # ls -la /myname/lib/libmpi.so.1 > > lrwxrwxrwx 1 root root 15 Apr 28 10:21 > /myname/lib/libmpi.so.1 -> libmpi.so.1.0.7 > > [root@host2 /] # > > > > If I ran the ./hello.out binary inside host2, it works fine > > > > [root@host1 tmp]# ssh host2 > > [root@host2 /] # /tmp/hello.out > > I am parent > > [root@host2 /] # > > > > Can someone help me figure out why I cannot run hello.out in host2 from > host1 ? > > Am I missing any env variables ? > > > > Thank you, > > > > Eiichi > > > > > > _______________________________________________ > > users mailing list > > us...@open-mpi.org > > http://www.open-mpi.org/mailman/listinfo.cgi/users > > > _______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users >
