On Mar 11, 2014, at 11:22 AM, Åke Sandgren <ake.sandg...@hpc2n.umu.se> wrote:
>>> ../configure CC=pgcc CXX=pgCC FC=pgf90 F90=pgf90 >>> --prefix=/usr/local/Cluster-Users/fs395/openmpi-1.7.4/pgi-14.2_cuda-6.0RC >>> --enable-mpirun-prefix-by-default --with-hcoll=$HCOLL_DIR >>> --with-fca=$FCA_DIR --with-mxm=$MXM_DIR --with-knem=$KNEM_DIR >>> --with-slurm=/usr/local/Cluster-Apps/slurm --with-cuda=$CUDA_INSTALL_PATH >>> >>> >>> At some point the compile process fails with this error: >>> >>> make[2]: Leaving directory >>> `/home/fs395/archive/openmpi-1.7.4/build/ompi/mca/coll/hierarch' >>> Making all in mca/coll/hcoll >>> make[2]: Entering directory >>> `/home/fs395/archive/openmpi-1.7.4/build/ompi/mca/coll/hcoll' >>> CC coll_hcoll_module.lo >>> CC coll_hcoll_component.lo >>> CC coll_hcoll_rte.lo >>> CC coll_hcoll_ops.lo >>> CCLD mca_coll_hcoll.la >>> pgcc-Error-Unknown switch: -pthread > > You have to remove the -pthread from inherited_linker_flags= > in libpmi.la libslurm.la from your slurm build. With the configure line given above, I don't think he should be linking against libslurm. But I wonder if the underlying issue is actually correct: perhaps the inherited_linker_flags from libhcoll.la has -pthreads in it. > pgi doesn't under stand it and the default slurm build (with gcc at least) > adds that causing the problem. -- Jeff Squyres jsquy...@cisco.com For corporate legal information go to: http://www.cisco.com/web/about/doing_business/legal/cri/
