You are missing the numactl and numactl-devel packages on that compute node, and so we cannot bind the memory to the same location as your proc. As the warning indicates, it can impact performance but won't stop you from running
> On Mar 12, 2015, at 12:51 PM, Saliya Ekanayake <esal...@gmail.com> wrote: > > Hi, > > I am getting the following binding warning and wonder if I am missing some > library or so > > -------------------------------------------------------------------------- > WARNING: a request was made to bind a process. While the system > supports binding the process itself, at least one node does NOT > support binding memory to the process location. > > Node: cn19ib > > This is a warning only; your job will continue, though performance may > be degraded. > -------------------------------------------------------------------------- > [cn19:09179] MCW rank 0 bound to socket 0[core 0[hwt 0]], socket 0[core 1[hwt > 0]], socket 0[core 2[hwt 0]], socket 0[core 3[hwt 0]], socket 0[core 4[hwt > 0]], socket 0[core 5[hwt 0]]: > [B/B/B/B/B/B][./././././.][./././././.][./././././.] > > Thank you, > Saliya > > -- > Saliya Ekanayake > Ph.D. Candidate | Research Assistant > School of Informatics and Computing | Digital Science Center > Indiana University, Bloomington > Cell 812-391-4914 > http://saliya.org > <http://saliya.org/>_______________________________________________ > users mailing list > us...@open-mpi.org > Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/users > Link to this post: > http://www.open-mpi.org/community/lists/users/2015/03/26454.php
