Hi Gilles, > with respect to PBS, are both OpenMPI built the same way ? > e.g. configure --with-tm=/opt/pbs/default or something similar
Both are built against TM explicitly using the --with-tm option. > you ran run > mpirun --mca plm_base_verbose 100 --mca ess_base_verbose 100 --mca ras_base_verbose 100 hostname > and you should see the "tm" module in the logs. Yes, it appears to use TM from what I can see. Outputs from 1.10.0 and 1.10.2 are attached from inside the same job - they look identical (apart from the pids), except at the very end where 1.10.2 errors out while 1.10.1 continues. > i noticed you run > mpirun -np 2 ... > is there any reason why you explicitly request 2 tasks ? The "-np 2" is because that's what I was using to benchmark the install (osu_bibw) and I just copied it over from when I realised it wasn't even starting. But it does the same regardless of whether I specify the number of processes or not (without it gets the number of tasks from PBS). > by any chance, is hyperthreading enabled on your compute node ? > /* if yes, that means all cores are in the cpuset, but with only one thread per core */ The nodes are 2 x 8-core sockets with hyper-threading on, and you can chose whether to use the extra hardware threads when submitting the job. If you want them, your cgroup includes both threads on each core (e.g. 0-31), otherwise only one thread (e.g. 0-15) (cores 16-32 are the thread siblings of cores 0-15). For reference, the PBS job I was using above had ncpus=32,mem=16G, which becomes select=2:ncpus=16:mpiprocs=16:mem=8589934592b under the hood with a cpuset containing cores 0-15 on each of the two nodes. Interestingly, if I use a cpuset containing both threads of each physical core (i.e. ask for hyperthreading on job submission), then it runs fine under 1.10.2. Cheers, Ben -----Original Message----- From: users [mailto:users-boun...@open-mpi.org] On Behalf Of Gilles Gouaillardet Sent: Friday, 29 January 2016 11:07 AM To: Open MPI Users <us...@open-mpi.org> Subject: Re: [OMPI users] Any changes to rmaps in 1.10.2? Ben, that is not needed if you submit with qsub -l nodes=1:ppn=2 do you observe the same behavior without -np 2 ? Cheers, Gilles On 1/28/2016 7:57 AM, Ben Menadue wrote: > Hi, > > Were there any changes to rmaps in going to 1.10.2? An > otherwise-identical setup that worked in 1.10.0 fails to launch in > 1.10.2, complaining that there's no CPUs available in a socket... > > With 1.10.0: > > $ /apps/openmpi/1.10.0/bin/mpirun -np 2 -mca rmaps_base_verbose 1000 > hostname [r47:18709] mca: base: components_register: registering rmaps > components [r47:18709] mca: base: components_register: found loaded > component resilient [r47:18709] mca: base: components_register: > component resilient register function successful [r47:18709] mca: > base: components_register: found loaded component rank_file > [r47:18709] mca: base: components_register: component rank_file > register function successful [r47:18709] mca: base: > components_register: found loaded component staged [r47:18709] mca: > base: components_register: component staged has no register or open > function [r47:18709] mca: base: components_register: found loaded > component ppr [r47:18709] mca: base: components_register: component > ppr register function successful [r47:18709] mca: base: > components_register: found loaded component seq [r47:18709] mca: base: > components_register: component seq register function successful > [r47:18709] mca: base: components_register: found loaded component > round_robin [r47:18709] mca: base: components_register: component > round_robin register function successful [r47:18709] mca: base: > components_register: found loaded component mindist [r47:18709] mca: > base: components_register: component mindist register function > successful [r47:18709] [[63529,0],0] rmaps:base set policy with core > [r47:18709] mca: base: components_open: opening rmaps components > [r47:18709] mca: base: components_open: found loaded component > resilient [r47:18709] mca: base: components_open: component resilient > open function successful [r47:18709] mca: base: components_open: found > loaded component rank_file [r47:18709] mca: base: components_open: > component rank_file open function successful [r47:18709] mca: base: > components_open: found loaded component staged [r47:18709] mca: base: > components_open: component staged open function successful [r47:18709] > mca: base: components_open: found loaded component ppr [r47:18709] > mca: base: components_open: component ppr open function successful > [r47:18709] mca: base: components_open: found loaded component seq > [r47:18709] mca: base: components_open: component seq open function > successful [r47:18709] mca: base: components_open: found loaded > component round_robin [r47:18709] mca: base: components_open: > component round_robin open function successful [r47:18709] mca: base: > components_open: found loaded component mindist [r47:18709] mca: base: > components_open: component mindist open function successful > [r47:18709] mca:rmaps:select: checking available component resilient > [r47:18709] mca:rmaps:select: Querying component [resilient] > [r47:18709] mca:rmaps:select: checking available component rank_file > [r47:18709] mca:rmaps:select: Querying component [rank_file] > [r47:18709] mca:rmaps:select: checking available component staged > [r47:18709] mca:rmaps:select: Querying component [staged] [r47:18709] > mca:rmaps:select: checking available component ppr [r47:18709] > mca:rmaps:select: Querying component [ppr] [r47:18709] > mca:rmaps:select: checking available component seq [r47:18709] > mca:rmaps:select: Querying component [seq] [r47:18709] > mca:rmaps:select: checking available component round_robin [r47:18709] > mca:rmaps:select: Querying component [round_robin] [r47:18709] > mca:rmaps:select: checking available component mindist [r47:18709] > mca:rmaps:select: Querying component [mindist] [r47:18709] > [[63529,0],0]: Final mapper priorities > [r47:18709] Mapper: ppr Priority: 90 > [r47:18709] Mapper: seq Priority: 60 > [r47:18709] Mapper: resilient Priority: 40 > [r47:18709] Mapper: mindist Priority: 20 > [r47:18709] Mapper: round_robin Priority: 10 > [r47:18709] Mapper: staged Priority: 5 > [r47:18709] Mapper: rank_file Priority: 0 > [r47:18709] mca:rmaps: mapping job [63529,1] [r47:18709] mca:rmaps: > creating new map for job [63529,1] [r47:18709] mca:rmaps: nprocs 2 > [r47:18709] mca:rmaps mapping given - using default [r47:18709] > mca:rmaps:ppr: job [63529,1] not using ppr mapper [r47:18709] > mca:rmaps:seq: job [63529,1] not using seq mapper [r47:18709] > mca:rmaps:resilient: cannot perform initial map of job [63529,1] > - no fault groups > [r47:18709] mca:rmaps:mindist: job [63529,1] not using mindist mapper > [r47:18709] mca:rmaps:rr: mapping job [63529,1] [r47:18709] AVAILABLE > NODES FOR MAPPING: > [r47:18709] node: r47 daemon: 0 > [r47:18709] node: r57 daemon: 1 > [r47:18709] node: r58 daemon: 2 > [r47:18709] node: r59 daemon: 3 > [r47:18709] mca:rmaps:rr: mapping no-span by Core for job [63529,1] > slots 64 num_procs 2 [r47:18709] mca:rmaps:rr: found 16 Core objects > on node r47 [r47:18709] mca:rmaps:rr: assigning proc to object 0 > [r47:18709] mca:rmaps:rr: assigning proc to object 1 [r47:18709] > mca:rmaps: computing ranks by core for job [63529,1] [r47:18709] > mca:rmaps:rank_by: found 16 objects on node r47 with 2 procs > [r47:18709] mca:rmaps:rank_by: assigned rank 0 [r47:18709] > mca:rmaps:rank_by: assigned rank 1 [r47:18709] mca:rmaps:rank_by: > found 16 objects on node r57 with 0 procs [r47:18709] > mca:rmaps:rank_by: found 16 objects on node r58 with 0 procs > [r47:18709] mca:rmaps:rank_by: found 16 objects on node r59 with 0 > procs [r47:18709] mca:rmaps: compute bindings for job [63529,1] with > policy CORE[4008] [r47:18709] mca:rmaps: bindings for job [63529,1] - > bind in place [r47:18709] mca:rmaps: bind in place for job [63529,1] > with bindings CORE [r47:18709] [[63529,0],0] reset_usage: node r47 has > 2 procs on it [r47:18709] [[63529,0],0] reset_usage: ignoring proc > [[63529,1],0] [r47:18709] [[63529,0],0] reset_usage: ignoring proc > [[63529,1],1] [r47:18709] BINDING PROC [[63529,1],0] TO Core NUMBER 0 > [r47:18709] [[63529,0],0] BOUND PROC [[63529,1],0] TO 0[Core:0] on > node r47 [r47:18709] BINDING PROC [[63529,1],1] TO Core NUMBER 1 > [r47:18709] [[63529,0],0] BOUND PROC [[63529,1],1] TO 1[Core:1] on > node r47 > r47 > r47 > [r47:18709] mca: base: close: component resilient closed [r47:18709] > mca: base: close: unloading component resilient [r47:18709] mca: base: > close: component rank_file closed [r47:18709] mca: base: close: > unloading component rank_file [r47:18709] mca: base: close: component > staged closed [r47:18709] mca: base: close: unloading component staged > [r47:18709] mca: base: close: component ppr closed [r47:18709] mca: > base: close: unloading component ppr [r47:18709] mca: base: close: > component seq closed [r47:18709] mca: base: close: unloading component > seq [r47:18709] mca: base: close: component round_robin closed > [r47:18709] mca: base: close: unloading component round_robin > [r47:18709] mca: base: close: component mindist closed [r47:18709] > mca: base: close: unloading component mindist > > With 1.10.2: > > $ /apps/openmpi/1.10.2/bin/mpirun -np 2 -mca rmaps_base_verbose 1000 > hostname [r47:18733] mca: base: components_register: registering rmaps > components [r47:18733] mca: base: components_register: found loaded > component resilient [r47:18733] mca: base: components_register: > component resilient register function successful [r47:18733] mca: > base: components_register: found loaded component rank_file > [r47:18733] mca: base: components_register: component rank_file > register function successful [r47:18733] mca: base: > components_register: found loaded component staged [r47:18733] mca: > base: components_register: component staged has no register or open > function [r47:18733] mca: base: components_register: found loaded > component ppr [r47:18733] mca: base: components_register: component > ppr register function successful [r47:18733] mca: base: > components_register: found loaded component seq [r47:18733] mca: base: > components_register: component seq register function successful > [r47:18733] mca: base: components_register: found loaded component > round_robin [r47:18733] mca: base: components_register: component > round_robin register function successful [r47:18733] mca: base: > components_register: found loaded component mindist [r47:18733] mca: > base: components_register: component mindist register function > successful [r47:18733] [[63505,0],0] rmaps:base set policy with core > [r47:18733] mca: base: components_open: opening rmaps components > [r47:18733] mca: base: components_open: found loaded component > resilient [r47:18733] mca: base: components_open: component resilient > open function successful [r47:18733] mca: base: components_open: found > loaded component rank_file [r47:18733] mca: base: components_open: > component rank_file open function successful [r47:18733] mca: base: > components_open: found loaded component staged [r47:18733] mca: base: > components_open: component staged open function successful [r47:18733] > mca: base: components_open: found loaded component ppr [r47:18733] > mca: base: components_open: component ppr open function successful > [r47:18733] mca: base: components_open: found loaded component seq > [r47:18733] mca: base: components_open: component seq open function > successful [r47:18733] mca: base: components_open: found loaded > component round_robin [r47:18733] mca: base: components_open: > component round_robin open function successful [r47:18733] mca: base: > components_open: found loaded component mindist [r47:18733] mca: base: > components_open: component mindist open function successful > [r47:18733] mca:rmaps:select: checking available component resilient > [r47:18733] mca:rmaps:select: Querying component [resilient] > [r47:18733] mca:rmaps:select: checking available component rank_file > [r47:18733] mca:rmaps:select: Querying component [rank_file] > [r47:18733] mca:rmaps:select: checking available component staged > [r47:18733] mca:rmaps:select: Querying component [staged] [r47:18733] > mca:rmaps:select: checking available component ppr [r47:18733] > mca:rmaps:select: Querying component [ppr] [r47:18733] > mca:rmaps:select: checking available component seq [r47:18733] > mca:rmaps:select: Querying component [seq] [r47:18733] > mca:rmaps:select: checking available component round_robin [r47:18733] > mca:rmaps:select: Querying component [round_robin] [r47:18733] > mca:rmaps:select: checking available component mindist [r47:18733] > mca:rmaps:select: Querying component [mindist] [r47:18733] > [[63505,0],0]: Final mapper priorities > [r47:18733] Mapper: ppr Priority: 90 > [r47:18733] Mapper: seq Priority: 60 > [r47:18733] Mapper: resilient Priority: 40 > [r47:18733] Mapper: mindist Priority: 20 > [r47:18733] Mapper: round_robin Priority: 10 > [r47:18733] Mapper: staged Priority: 5 > [r47:18733] Mapper: rank_file Priority: 0 > [r47:18733] mca:rmaps: mapping job [63505,1] [r47:18733] mca:rmaps: > creating new map for job [63505,1] [r47:18733] mca:rmaps: nprocs 2 > [r47:18733] mca:rmaps mapping given - using default [r47:18733] > mca:rmaps:ppr: job [63505,1] not using ppr mapper [r47:18733] > mca:rmaps:seq: job [63505,1] not using seq mapper [r47:18733] > mca:rmaps:resilient: cannot perform initial map of job [63505,1] > - no fault groups > [r47:18733] mca:rmaps:mindist: job [63505,1] not using mindist mapper > [r47:18733] mca:rmaps:rr: mapping job [63505,1] [r47:18733] AVAILABLE > NODES FOR MAPPING: > [r47:18733] node: r47 daemon: 0 > [r47:18733] node: r57 daemon: 1 > [r47:18733] node: r58 daemon: 2 > [r47:18733] node: r59 daemon: 3 > [r47:18733] mca:rmaps:rr: mapping no-span by Core for job [63505,1] > slots 64 num_procs 2 [r47:18733] mca:rmaps:rr: found 16 Core objects > on node r47 [r47:18733] mca:rmaps:rr: assigning proc to object 0 > ---------------------------------------------------------------------- > ---- A request for multiple cpus-per-proc was given, but a directive > was also give to map to an object level that has less cpus than > requested ones: > > #cpus-per-proc: 1 > number of cpus: 0 > map-by: BYCORE:NOOVERSUBSCRIBE > > Please specify a mapping level that has more cpus, or else let us > define a default mapping that will allow multiple cpus-per-proc. > ---------------------------------------------------------------------- > ---- [r47:18733] mca: base: close: component resilient closed > [r47:18733] mca: base: close: unloading component resilient > [r47:18733] mca: base: close: component rank_file closed [r47:18733] > mca: base: close: unloading component rank_file [r47:18733] mca: base: > close: component staged closed [r47:18733] mca: base: close: unloading > component staged [r47:18733] mca: base: close: component ppr closed > [r47:18733] mca: base: close: unloading component ppr [r47:18733] mca: > base: close: component seq closed [r47:18733] mca: base: close: > unloading component seq [r47:18733] mca: base: close: component > round_robin closed [r47:18733] mca: base: close: unloading component > round_robin [r47:18733] mca: base: close: component mindist closed > [r47:18733] mca: base: close: unloading component mindist > > There are both in the same PBS Pro job. And the cpuset definitely has > all cores available: > > $ cat /cgroup/cpuset/pbspro/4347646.r-man2/cpuset.cpus > 0-15 > > Is there something here I'm missing? > > Cheers, > Ben > > > _______________________________________________ > users mailing list > us...@open-mpi.org > Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/users > Link to this post: > http://www.open-mpi.org/community/lists/users/2016/01/28393.php > _______________________________________________ users mailing list us...@open-mpi.org Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/users Link to this post: http://www.open-mpi.org/community/lists/users/2016/01/28400.php
12:25 bjm900@r69 ~ > /apps/openmpi/1.10.0/bin/mpirun --mca plm_base_verbose 100
--mca ess_base_verbose 100 --mca ras_base_verbose 100 hostname
[r69:10749] mca: base: components_register: registering ess components
[r69:10749] mca: base: components_register: found loaded component hnp
[r69:10749] mca: base: components_register: component hnp has no register or
open function
[r69:10749] mca: base: components_register: found loaded component tm
[r69:10749] mca: base: components_register: component tm has no register or
open function
[r69:10749] mca: base: components_register: found loaded component singleton
[r69:10749] mca: base: components_register: component singleton register
function successful
[r69:10749] mca: base: components_register: found loaded component env
[r69:10749] mca: base: components_register: component env has no register or
open function
[r69:10749] mca: base: components_register: found loaded component tool
[r69:10749] mca: base: components_register: component tool has no register or
open function
[r69:10749] mca: base: components_open: opening ess components
[r69:10749] mca: base: components_open: found loaded component hnp
[r69:10749] mca: base: components_open: component hnp open function successful
[r69:10749] mca: base: components_open: found loaded component tm
[r69:10749] mca: base: components_open: component tm open function successful
[r69:10749] mca: base: components_open: found loaded component singleton
[r69:10749] mca: base: components_open: component singleton open function
successful
[r69:10749] mca: base: components_open: found loaded component env
[r69:10749] mca: base: components_open: component env open function successful
[r69:10749] mca: base: components_open: found loaded component tool
[r69:10749] mca: base: components_open: component tool open function successful
[r69:10749] mca:base:select: Auto-selecting ess components
[r69:10749] mca:base:select:( ess) Querying component [hnp]
[r69:10749] mca:base:select:( ess) Query of component [hnp] set priority to 100
[r69:10749] mca:base:select:( ess) Querying component [tm]
[r69:10749] mca:base:select:( ess) Skipping component [tm]. Query failed to
return a module
[r69:10749] mca:base:select:( ess) Querying component [singleton]
[r69:10749] mca:base:select:( ess) Skipping component [singleton]. Query
failed to return a module
[r69:10749] mca:base:select:( ess) Querying component [env]
[r69:10749] mca:base:select:( ess) Skipping component [env]. Query failed to
return a module
[r69:10749] mca:base:select:( ess) Querying component [tool]
[r69:10749] mca:base:select:( ess) Skipping component [tool]. Query failed to
return a module
[r69:10749] mca:base:select:( ess) Selected component [hnp]
[r69:10749] mca: base: close: component tm closed
[r69:10749] mca: base: close: unloading component tm
[r69:10749] mca: base: close: component singleton closed
[r69:10749] mca: base: close: unloading component singleton
[r69:10749] mca: base: close: component env closed
[r69:10749] mca: base: close: unloading component env
[r69:10749] mca: base: close: component tool closed
[r69:10749] mca: base: close: unloading component tool
[r69:10749] [[INVALID],INVALID] Topology Info:
[r69:10749] Type: Machine Number of child objects: 4
Name=NULL
total=33529896KB
DMIProductName="PRIMERGY CX250 S1"
DMIProductVersion=GS01
DMIBoardVendor=FUJITSU
DMIBoardName=D3196
DMIBoardVersion="S26361-D3196-A100 C3E"
DMIBoardAssetTag="To be filled by O.E.M."
DMIChassisVendor=FUJITSU
DMIChassisType=17
DMIChassisVersion=CX250S1R
DMIChassisAssetTag="To be filled by O.E.M."
DMIBIOSVendor=FUJITSU
DMIBIOSVersion="4.6.4 Rev.3B08.3196"
DMIBIOSDate=08/08/2012
DMISysVendor=FUJITSU
Backend=Linux
LinuxCgroup=/pbspro/4363029.r-man2
OSName=Linux
OSRelease=2.6.32-573.12.1.el6.x86_64
OSVersion="#1 SMP Tue Dec 15 21:19:08 UTC 2015"
Architecture=x86_64
Cpuset: 0xffffffff
Online: 0xffffffff
Allowed: 0x0000ffff
Bind CPU proc: TRUE
Bind CPU thread: TRUE
Bind MEM proc: FALSE
Bind MEM thread: TRUE
Type: NUMANode Number of child objects: 1
Name=NULL
local=16752680KB
total=16752680KB
Cpuset: 0x00ff00ff
Online: 0x00ff00ff
Allowed: 0x000000ff
Type: Socket Number of child objects: 1
Name=NULL
CPUVendor=GenuineIntel
CPUFamilyNumber=6
CPUModelNumber=45
CPUModel="Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz"
Cpuset: 0x00ff00ff
Online: 0x00ff00ff
Allowed: 0x000000ff
Type: L3Cache Number of child objects: 8
Name=NULL
size=20480KB
linesize=64
ways=20
Cpuset: 0x00ff00ff
Online: 0x00ff00ff
Allowed: 0x000000ff
Type: L2Cache Number of child objects: 1
Name=NULL
size=256KB
linesize=64
ways=8
Cpuset: 0x00010001
Online: 0x00010001
Allowed: 0x00000001
Type: L1dCache Number of child objects:
1
Name=NULL
size=32KB
linesize=64
ways=8
Cpuset: 0x00010001
Online: 0x00010001
Allowed: 0x00000001
Type: Core Number of child
objects: 2
Name=NULL
Cpuset: 0x00010001
Online: 0x00010001
Allowed: 0x00000001
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00000001
Online:
0x00000001
Allowed:
0x00000001
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00010000
Online:
0x00010000
Allowed: 0x0
Type: L2Cache Number of child objects: 1
Name=NULL
size=256KB
linesize=64
ways=8
Cpuset: 0x00020002
Online: 0x00020002
Allowed: 0x00000002
Type: L1dCache Number of child objects:
1
Name=NULL
size=32KB
linesize=64
ways=8
Cpuset: 0x00020002
Online: 0x00020002
Allowed: 0x00000002
Type: Core Number of child
objects: 2
Name=NULL
Cpuset: 0x00020002
Online: 0x00020002
Allowed: 0x00000002
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00000002
Online:
0x00000002
Allowed:
0x00000002
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00020000
Online:
0x00020000
Allowed: 0x0
Type: L2Cache Number of child objects: 1
Name=NULL
size=256KB
linesize=64
ways=8
Cpuset: 0x00040004
Online: 0x00040004
Allowed: 0x00000004
Type: L1dCache Number of child objects:
1
Name=NULL
size=32KB
linesize=64
ways=8
Cpuset: 0x00040004
Online: 0x00040004
Allowed: 0x00000004
Type: Core Number of child
objects: 2
Name=NULL
Cpuset: 0x00040004
Online: 0x00040004
Allowed: 0x00000004
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00000004
Online:
0x00000004
Allowed:
0x00000004
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00040000
Online:
0x00040000
Allowed: 0x0
Type: L2Cache Number of child objects: 1
Name=NULL
size=256KB
linesize=64
ways=8
Cpuset: 0x00080008
Online: 0x00080008
Allowed: 0x00000008
Type: L1dCache Number of child objects:
1
Name=NULL
size=32KB
linesize=64
ways=8
Cpuset: 0x00080008
Online: 0x00080008
Allowed: 0x00000008
Type: Core Number of child
objects: 2
Name=NULL
Cpuset: 0x00080008
Online: 0x00080008
Allowed: 0x00000008
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00000008
Online:
0x00000008
Allowed:
0x00000008
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00080000
Online:
0x00080000
Allowed: 0x0
Type: L2Cache Number of child objects: 1
Name=NULL
size=256KB
linesize=64
ways=8
Cpuset: 0x00100010
Online: 0x00100010
Allowed: 0x00000010
Type: L1dCache Number of child objects:
1
Name=NULL
size=32KB
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[r69:10749] mca: base: components_register: registering plm components
[r69:10749] mca: base: components_register: found loaded component rsh
[r69:10749] mca: base: components_register: component rsh register function
successful
[r69:10749] mca: base: components_register: found loaded component isolated
[r69:10749] mca: base: components_register: component isolated has no register
or open function
[r69:10749] mca: base: components_register: found loaded component tm
[r69:10749] mca: base: components_register: component tm register function
successful
[r69:10749] mca: base: components_open: opening plm components
[r69:10749] mca: base: components_open: found loaded component rsh
[r69:10749] mca: base: components_open: component rsh open function successful
[r69:10749] mca: base: components_open: found loaded component isolated
[r69:10749] mca: base: components_open: component isolated open function
successful
[r69:10749] mca: base: components_open: found loaded component tm
[r69:10749] mca: base: components_open: component tm open function successful
[r69:10749] mca:base:select: Auto-selecting plm components
[r69:10749] mca:base:select:( plm) Querying component [rsh]
[r69:10749] mca:base:select:( plm) Query of component [rsh] set priority to 10
[r69:10749] mca:base:select:( plm) Querying component [isolated]
[r69:10749] mca:base:select:( plm) Query of component [isolated] set priority
to 0
[r69:10749] mca:base:select:( plm) Querying component [tm]
[r69:10749] mca:base:select:( plm) Query of component [tm] set priority to 75
[r69:10749] mca:base:select:( plm) Selected component [tm]
[r69:10749] mca: base: close: component rsh closed
[r69:10749] mca: base: close: unloading component rsh
[r69:10749] mca: base: close: component isolated closed
[r69:10749] mca: base: close: unloading component isolated
[r69:10749] mca: base: components_register: registering ras components
[r69:10749] mca: base: components_register: found loaded component simulator
[r69:10749] mca: base: components_register: component simulator register
function successful
[r69:10749] mca: base: components_register: found loaded component tm
[r69:10749] mca: base: components_register: component tm register function
successful
[r69:10749] mca: base: components_open: opening ras components
[r69:10749] mca: base: components_open: found loaded component simulator
[r69:10749] mca: base: components_open: found loaded component tm
[r69:10749] mca: base: components_open: component tm open function successful
[r69:10749] mca:base:select: Auto-selecting ras components
[r69:10749] mca:base:select:( ras) Querying component [simulator]
[r69:10749] mca:base:select:( ras) Skipping component [simulator]. Query
failed to return a module
[r69:10749] mca:base:select:( ras) Querying component [tm]
[r69:10749] mca:base:select:( ras) Query of component [tm] set priority to 100
[r69:10749] mca:base:select:( ras) Selected component [tm]
[r69:10749] mca: base: close: unloading component simulator
====================== ALLOCATED NODES ======================
r69: slots=16 max_slots=0 slots_inuse=0 state=UP
r70: slots=16 max_slots=0 slots_inuse=0 state=UP
=================================================================
[r70:31847] mca: base: components_register: registering ess components
[r70:31847] mca: base: components_register: found loaded component tm
[r70:31847] mca: base: components_register: component tm has no register or
open function
[r70:31847] mca: base: components_open: opening ess components
[r70:31847] mca: base: components_open: found loaded component tm
[r70:31847] mca: base: components_open: component tm open function successful
[r70:31847] mca:base:select: Auto-selecting ess components
[r70:31847] mca:base:select:( ess) Querying component [tm]
[r70:31847] mca:base:select:( ess) Query of component [tm] set priority to 30
[r70:31847] mca:base:select:( ess) Selected component [tm]
[r70:31847] [[41140,0],1] Topology Info:
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Cpuset: 0x80008000
Online: 0x80008000
Allowed: 0x00008000
Type: Core Number of child
objects: 2
Name=NULL
Cpuset: 0x80008000
Online: 0x80008000
Allowed: 0x00008000
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00008000
Online:
0x00008000
Allowed:
0x00008000
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x80000000
Online:
0x80000000
Allowed: 0x0
Type: Bridge Host->PCI Number of child objects: 5
Name=NULL
buses=0000:[00-6f]
Type: PCI 8086:1521 Number of child objects: 0
Name=NULL
busid=0000:20:00.0
class=0200(Ether)
Type: PCI 8086:1521 Number of child objects: 0
Name=NULL
busid=0000:20:00.1
class=0200(Ether)
Type: PCI 8086:1d6b Number of child objects: 1
Name=NULL
busid=0000:40:00.0
class=0107(SAS)
Type: Block Number of child objects: 0
Name=sda
Type: PCI 1a03:2000 Number of child objects: 0
Name=NULL
busid=0000:51:00.0
class=0300(VGA)
Type: PCI 8086:1d02 Number of child objects: 0
Name=NULL
busid=0000:00:1f.2
class=0106(SATA)
Type: Bridge Host->PCI Number of child objects: 1
Name=NULL
buses=0000:[80-b3]
Type: PCI 15b3:1003 Number of child objects: 2
Name=NULL
busid=0000:b0:00.0
class=0280(Net)
Type: Network Number of child objects: 0
Name=ib0
Address=a0:00:01:00:fe:80:00:00:00:00:00:00:00:02:c9:03:00:17:e9:f1
Port=1
Type: OpenFabrics Number of child objects: 0
Name=mlx4_0
NodeGUID=0002:c903:0017:e9f0
SysImageGUID=0002:c903:0017:e9f3
Port1State=4
Port1LID=0x1080
Port1LMC=0
Port1GID0=fe80:0000:0000:0000:0002:c903:0017:e9f1
[r69:10749] [[41140,0],0] plm:base:receive update proc state command from
[[41140,0],1]
[r69:10749] [[41140,0],0] plm:base:receive got update_proc_state for job
[41140,1]
r69
r69
r69
r69
r69
r69
r69
r69
r69
r69
r69
r69
r69
r69
r69
r69
r70
r70
r70
r70
r70
r70
r70
r70
r70
r70
r70
r70
r70
r70
r70
r70
[r69:10749] [[41140,0],0] plm:base:receive update proc state command from
[[41140,0],1]
[r69:10749] [[41140,0],0] plm:base:receive got update_proc_state for job
[41140,1]
[r70:31847] mca: base: close: component tm closed
[r70:31847] mca: base: close: unloading component tm
[r69:10749] mca: base: close: unloading component tm
[r69:10749] mca: base: close: component tm closed
[r69:10749] mca: base: close: unloading component tm
[r69:10749] mca: base: close: component hnp closed
[r69:10749] mca: base: close: unloading component hnp
12:25 bjm900@r69 ~ > /apps/openmpi/1.10.2/bin/mpirun --mca plm_base_verbose 100
--mca ess_base_verbose 100 --mca ras_base_verbose 100 hostname
[r69:10728] mca: base: components_register: registering ess components
[r69:10728] mca: base: components_register: found loaded component hnp
[r69:10728] mca: base: components_register: component hnp has no register or
open function
[r69:10728] mca: base: components_register: found loaded component tm
[r69:10728] mca: base: components_register: component tm has no register or
open function
[r69:10728] mca: base: components_register: found loaded component singleton
[r69:10728] mca: base: components_register: component singleton register
function successful
[r69:10728] mca: base: components_register: found loaded component env
[r69:10728] mca: base: components_register: component env has no register or
open function
[r69:10728] mca: base: components_register: found loaded component tool
[r69:10728] mca: base: components_register: component tool has no register or
open function
[r69:10728] mca: base: components_open: opening ess components
[r69:10728] mca: base: components_open: found loaded component hnp
[r69:10728] mca: base: components_open: component hnp open function successful
[r69:10728] mca: base: components_open: found loaded component tm
[r69:10728] mca: base: components_open: component tm open function successful
[r69:10728] mca: base: components_open: found loaded component singleton
[r69:10728] mca: base: components_open: component singleton open function
successful
[r69:10728] mca: base: components_open: found loaded component env
[r69:10728] mca: base: components_open: component env open function successful
[r69:10728] mca: base: components_open: found loaded component tool
[r69:10728] mca: base: components_open: component tool open function successful
[r69:10728] mca:base:select: Auto-selecting ess components
[r69:10728] mca:base:select:( ess) Querying component [hnp]
[r69:10728] mca:base:select:( ess) Query of component [hnp] set priority to 100
[r69:10728] mca:base:select:( ess) Querying component [tm]
[r69:10728] mca:base:select:( ess) Skipping component [tm]. Query failed to
return a module
[r69:10728] mca:base:select:( ess) Querying component [singleton]
[r69:10728] mca:base:select:( ess) Skipping component [singleton]. Query
failed to return a module
[r69:10728] mca:base:select:( ess) Querying component [env]
[r69:10728] mca:base:select:( ess) Skipping component [env]. Query failed to
return a module
[r69:10728] mca:base:select:( ess) Querying component [tool]
[r69:10728] mca:base:select:( ess) Skipping component [tool]. Query failed to
return a module
[r69:10728] mca:base:select:( ess) Selected component [hnp]
[r69:10728] mca: base: close: component tm closed
[r69:10728] mca: base: close: unloading component tm
[r69:10728] mca: base: close: component singleton closed
[r69:10728] mca: base: close: unloading component singleton
[r69:10728] mca: base: close: component env closed
[r69:10728] mca: base: close: unloading component env
[r69:10728] mca: base: close: component tool closed
[r69:10728] mca: base: close: unloading component tool
[r69:10728] [[INVALID],INVALID] Topology Info:
[r69:10728] Type: Machine Number of child objects: 4
Name=NULL
total=33529896KB
DMIProductName="PRIMERGY CX250 S1"
DMIProductVersion=GS01
DMIBoardVendor=FUJITSU
DMIBoardName=D3196
DMIBoardVersion="S26361-D3196-A100 C3E"
DMIBoardAssetTag="To be filled by O.E.M."
DMIChassisVendor=FUJITSU
DMIChassisType=17
DMIChassisVersion=CX250S1R
DMIChassisAssetTag="To be filled by O.E.M."
DMIBIOSVendor=FUJITSU
DMIBIOSVersion="4.6.4 Rev.3B08.3196"
DMIBIOSDate=08/08/2012
DMISysVendor=FUJITSU
Backend=Linux
LinuxCgroup=/pbspro/4363029.r-man2
OSName=Linux
OSRelease=2.6.32-573.12.1.el6.x86_64
OSVersion="#1 SMP Tue Dec 15 21:19:08 UTC 2015"
Architecture=x86_64
Cpuset: 0xffffffff
Online: 0xffffffff
Allowed: 0x0000ffff
Bind CPU proc: TRUE
Bind CPU thread: TRUE
Bind MEM proc: FALSE
Bind MEM thread: TRUE
Type: NUMANode Number of child objects: 1
Name=NULL
local=16752680KB
total=16752680KB
Cpuset: 0x00ff00ff
Online: 0x00ff00ff
Allowed: 0x000000ff
Type: Socket Number of child objects: 1
Name=NULL
CPUVendor=GenuineIntel
CPUFamilyNumber=6
CPUModelNumber=45
CPUModel="Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz"
Cpuset: 0x00ff00ff
Online: 0x00ff00ff
Allowed: 0x000000ff
Type: L3Cache Number of child objects: 8
Name=NULL
size=20480KB
linesize=64
ways=20
Cpuset: 0x00ff00ff
Online: 0x00ff00ff
Allowed: 0x000000ff
Type: L2Cache Number of child objects: 1
Name=NULL
size=256KB
linesize=64
ways=8
Cpuset: 0x00010001
Online: 0x00010001
Allowed: 0x00000001
Type: L1dCache Number of child objects:
1
Name=NULL
size=32KB
linesize=64
ways=8
Cpuset: 0x00010001
Online: 0x00010001
Allowed: 0x00000001
Type: Core Number of child
objects: 2
Name=NULL
Cpuset: 0x00010001
Online: 0x00010001
Allowed: 0x00000001
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00000001
Online:
0x00000001
Allowed:
0x00000001
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00010000
Online:
0x00010000
Allowed: 0x0
Type: L2Cache Number of child objects: 1
Name=NULL
size=256KB
linesize=64
ways=8
Cpuset: 0x00020002
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Allowed: 0x00000002
Type: L1dCache Number of child objects:
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Name=NULL
size=32KB
linesize=64
ways=8
Cpuset: 0x00020002
Online: 0x00020002
Allowed: 0x00000002
Type: Core Number of child
objects: 2
Name=NULL
Cpuset: 0x00020002
Online: 0x00020002
Allowed: 0x00000002
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00000002
Online:
0x00000002
Allowed:
0x00000002
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00020000
Online:
0x00020000
Allowed: 0x0
Type: L2Cache Number of child objects: 1
Name=NULL
size=256KB
linesize=64
ways=8
Cpuset: 0x00040004
Online: 0x00040004
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Type: L1dCache Number of child objects:
1
Name=NULL
size=32KB
linesize=64
ways=8
Cpuset: 0x00040004
Online: 0x00040004
Allowed: 0x00000004
Type: Core Number of child
objects: 2
Name=NULL
Cpuset: 0x00040004
Online: 0x00040004
Allowed: 0x00000004
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00000004
Online:
0x00000004
Allowed:
0x00000004
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00040000
Online:
0x00040000
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Type: L2Cache Number of child objects: 1
Name=NULL
size=256KB
linesize=64
ways=8
Cpuset: 0x00080008
Online: 0x00080008
Allowed: 0x00000008
Type: L1dCache Number of child objects:
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Name=NULL
size=32KB
linesize=64
ways=8
Cpuset: 0x00080008
Online: 0x00080008
Allowed: 0x00000008
Type: Core Number of child
objects: 2
Name=NULL
Cpuset: 0x00080008
Online: 0x00080008
Allowed: 0x00000008
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00000008
Online:
0x00000008
Allowed:
0x00000008
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00080000
Online:
0x00080000
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Type: L2Cache Number of child objects: 1
Name=NULL
size=256KB
linesize=64
ways=8
Cpuset: 0x00100010
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Allowed: 0x00000010
Type: L1dCache Number of child objects:
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Name=NULL
size=32KB
linesize=64
ways=8
Cpuset: 0x00100010
Online: 0x00100010
Allowed: 0x00000010
Type: Core Number of child
objects: 2
Name=NULL
Cpuset: 0x00100010
Online: 0x00100010
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Type: PU Number of
child objects: 0
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Cpuset:
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Online:
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0x00000010
Type: PU Number of
child objects: 0
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Cpuset:
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Online:
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Type: L2Cache Number of child objects: 1
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size=256KB
linesize=64
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Cpuset: 0x00200020
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Type: L1dCache Number of child objects:
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Name=NULL
size=32KB
linesize=64
ways=8
Cpuset: 0x00200020
Online: 0x00200020
Allowed: 0x00000020
Type: Core Number of child
objects: 2
Name=NULL
Cpuset: 0x00200020
Online: 0x00200020
Allowed: 0x00000020
Type: PU Number of
child objects: 0
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Cpuset:
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Online:
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Allowed:
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Type: PU Number of
child objects: 0
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Cpuset:
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Online:
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Type: L2Cache Number of child objects: 1
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size=256KB
linesize=64
ways=8
Cpuset: 0x00400040
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Allowed: 0x00000040
Type: L1dCache Number of child objects:
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Name=NULL
size=32KB
linesize=64
ways=8
Cpuset: 0x00400040
Online: 0x00400040
Allowed: 0x00000040
Type: Core Number of child
objects: 2
Name=NULL
Cpuset: 0x00400040
Online: 0x00400040
Allowed: 0x00000040
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00000040
Online:
0x00000040
Allowed:
0x00000040
Type: PU Number of
child objects: 0
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Cpuset:
0x00400000
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Type: L2Cache Number of child objects: 1
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size=256KB
linesize=64
ways=8
Cpuset: 0x00800080
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Allowed: 0x00000080
Type: L1dCache Number of child objects:
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Name=NULL
size=32KB
linesize=64
ways=8
Cpuset: 0x00800080
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Allowed: 0x00000080
Type: Core Number of child
objects: 2
Name=NULL
Cpuset: 0x00800080
Online: 0x00800080
Allowed: 0x00000080
Type: PU Number of
child objects: 0
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Cpuset:
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Online:
0x00000080
Allowed:
0x00000080
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00800000
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Type: NUMANode Number of child objects: 1
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local=16777216KB
total=16777216KB
Cpuset: 0xff00ff00
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Type: Socket Number of child objects: 1
Name=NULL
CPUVendor=GenuineIntel
CPUFamilyNumber=6
CPUModelNumber=45
CPUModel="Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz"
Cpuset: 0xff00ff00
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Type: L3Cache Number of child objects: 8
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size=20480KB
linesize=64
ways=20
Cpuset: 0xff00ff00
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Type: L2Cache Number of child objects: 1
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size=256KB
linesize=64
ways=8
Cpuset: 0x01000100
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Type: L1dCache Number of child objects:
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size=32KB
linesize=64
ways=8
Cpuset: 0x01000100
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Type: Core Number of child
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Cpuset: 0x01000100
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Type: PU Number of
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Type: PU Number of
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Type: L2Cache Number of child objects: 1
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child objects: 0
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size=256KB
linesize=64
ways=8
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size=32KB
linesize=64
ways=8
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objects: 2
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child objects: 0
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child objects: 0
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linesize=64
ways=8
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Online: 0x10001000
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child objects: 0
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Cpuset:
0x00001000
Online:
0x00001000
Allowed:
0x00001000
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x10000000
Online:
0x10000000
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Type: L2Cache Number of child objects: 1
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size=256KB
linesize=64
ways=8
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Name=NULL
size=32KB
linesize=64
ways=8
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Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00002000
Online:
0x00002000
Allowed:
0x00002000
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x20000000
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0x20000000
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Type: L2Cache Number of child objects: 1
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size=256KB
linesize=64
ways=8
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size=32KB
linesize=64
ways=8
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Name=NULL
Cpuset: 0x40004000
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child objects: 0
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Cpuset:
0x00004000
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0x00004000
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0x00004000
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child objects: 0
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Cpuset:
0x40000000
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0x40000000
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size=256KB
linesize=64
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Name=NULL
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linesize=64
ways=8
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Name=NULL
Cpuset: 0x80008000
Online: 0x80008000
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Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00008000
Online:
0x00008000
Allowed:
0x00008000
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x80000000
Online:
0x80000000
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Type: Bridge Host->PCI Number of child objects: 5
Name=NULL
buses=0000:[00-6f]
Type: PCI 8086:1521 Number of child objects: 0
Name=NULL
busid=0000:20:00.0
class=0200(Ether)
Type: PCI 8086:1521 Number of child objects: 0
Name=NULL
busid=0000:20:00.1
class=0200(Ether)
Type: PCI 8086:1d6b Number of child objects: 1
Name=NULL
busid=0000:40:00.0
class=0107(SAS)
Type: Block Number of child objects: 0
Name=sda
Type: PCI 1a03:2000 Number of child objects: 0
Name=NULL
busid=0000:51:00.0
class=0300(VGA)
Type: PCI 8086:1d02 Number of child objects: 0
Name=NULL
busid=0000:00:1f.2
class=0106(SATA)
Type: Bridge Host->PCI Number of child objects: 1
Name=NULL
buses=0000:[80-b3]
Type: PCI 15b3:1003 Number of child objects: 2
Name=NULL
busid=0000:b0:00.0
class=0280(Net)
Type: Network Number of child objects: 0
Name=ib0
Address=a0:00:01:00:fe:80:00:00:00:00:00:00:00:02:c9:03:00:1a:77:81
Port=1
Type: OpenFabrics Number of child objects: 0
Name=mlx4_0
NodeGUID=0002:c903:001a:7780
SysImageGUID=0002:c903:001a:7783
Port1State=4
Port1LID=0x1073
Port1LMC=0
Port1GID0=fe80:0000:0000:0000:0002:c903:001a:7781
[r69:10728] mca: base: components_register: registering plm components
[r69:10728] mca: base: components_register: found loaded component rsh
[r69:10728] mca: base: components_register: component rsh register function
successful
[r69:10728] mca: base: components_register: found loaded component isolated
[r69:10728] mca: base: components_register: component isolated has no register
or open function
[r69:10728] mca: base: components_register: found loaded component tm
[r69:10728] mca: base: components_register: component tm register function
successful
[r69:10728] mca: base: components_open: opening plm components
[r69:10728] mca: base: components_open: found loaded component rsh
[r69:10728] mca: base: components_open: component rsh open function successful
[r69:10728] mca: base: components_open: found loaded component isolated
[r69:10728] mca: base: components_open: component isolated open function
successful
[r69:10728] mca: base: components_open: found loaded component tm
[r69:10728] mca: base: components_open: component tm open function successful
[r69:10728] mca:base:select: Auto-selecting plm components
[r69:10728] mca:base:select:( plm) Querying component [rsh]
[r69:10728] mca:base:select:( plm) Query of component [rsh] set priority to 10
[r69:10728] mca:base:select:( plm) Querying component [isolated]
[r69:10728] mca:base:select:( plm) Query of component [isolated] set priority
to 0
[r69:10728] mca:base:select:( plm) Querying component [tm]
[r69:10728] mca:base:select:( plm) Query of component [tm] set priority to 75
[r69:10728] mca:base:select:( plm) Selected component [tm]
[r69:10728] mca: base: close: component rsh closed
[r69:10728] mca: base: close: unloading component rsh
[r69:10728] mca: base: close: component isolated closed
[r69:10728] mca: base: close: unloading component isolated
[r69:10728] mca: base: components_register: registering ras components
[r69:10728] mca: base: components_register: found loaded component simulator
[r69:10728] mca: base: components_register: component simulator register
function successful
[r69:10728] mca: base: components_register: found loaded component tm
[r69:10728] mca: base: components_register: component tm register function
successful
[r69:10728] mca: base: components_open: opening ras components
[r69:10728] mca: base: components_open: found loaded component simulator
[r69:10728] mca: base: components_open: found loaded component tm
[r69:10728] mca: base: components_open: component tm open function successful
[r69:10728] mca:base:select: Auto-selecting ras components
[r69:10728] mca:base:select:( ras) Querying component [simulator]
[r69:10728] mca:base:select:( ras) Skipping component [simulator]. Query
failed to return a module
[r69:10728] mca:base:select:( ras) Querying component [tm]
[r69:10728] mca:base:select:( ras) Query of component [tm] set priority to 100
[r69:10728] mca:base:select:( ras) Selected component [tm]
[r69:10728] mca: base: close: unloading component simulator
====================== ALLOCATED NODES ======================
r69: slots=16 max_slots=0 slots_inuse=0 state=UP
r70: slots=16 max_slots=0 slots_inuse=0 state=UP
=================================================================
[r70:31839] mca: base: components_register: registering ess components
[r70:31839] mca: base: components_register: found loaded component tm
[r70:31839] mca: base: components_register: component tm has no register or
open function
[r70:31839] mca: base: components_open: opening ess components
[r70:31839] mca: base: components_open: found loaded component tm
[r70:31839] mca: base: components_open: component tm open function successful
[r70:31839] mca:base:select: Auto-selecting ess components
[r70:31839] mca:base:select:( ess) Querying component [tm]
[r70:31839] mca:base:select:( ess) Query of component [tm] set priority to 30
[r70:31839] mca:base:select:( ess) Selected component [tm]
[r70:31839] [[41121,0],1] Topology Info:
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Name=NULL
buses=0000:[00-6f]
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busid=0000:20:00.0
class=0200(Ether)
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busid=0000:20:00.1
class=0200(Ether)
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busid=0000:40:00.0
class=0107(SAS)
Type: Block Number of child objects: 0
Name=sda
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busid=0000:51:00.0
class=0300(VGA)
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Name=NULL
busid=0000:00:1f.2
class=0106(SATA)
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Name=NULL
buses=0000:[80-b3]
Type: PCI 15b3:1003 Number of child objects: 2
Name=NULL
busid=0000:b0:00.0
class=0280(Net)
Type: Network Number of child objects: 0
Name=ib0
Address=a0:00:01:00:fe:80:00:00:00:00:00:00:00:02:c9:03:00:17:e9:f1
Port=1
Type: OpenFabrics Number of child objects: 0
Name=mlx4_0
NodeGUID=0002:c903:0017:e9f0
SysImageGUID=0002:c903:0017:e9f3
Port1State=4
Port1LID=0x1080
Port1LMC=0
Port1GID0=fe80:0000:0000:0000:0002:c903:0017:e9f1
--------------------------------------------------------------------------
A request for multiple cpus-per-proc was given, but a directive
was also give to map to an object level that has less cpus than
requested ones:
#cpus-per-proc: 1
number of cpus: 0
map-by: BYCORE:NOOVERSUBSCRIBE
Please specify a mapping level that has more cpus, or else let us
define a default mapping that will allow multiple cpus-per-proc.
--------------------------------------------------------------------------
[r70:31839] mca: base: close: component tm closed
[r70:31839] mca: base: close: unloading component tm
[r69:10728] mca: base: close: unloading component tm
[r69:10728] mca: base: close: component tm closed
[r69:10728] mca: base: close: unloading component tm
[r69:10728] mca: base: close: component hnp closed
[r69:10728] mca: base: close: unloading component hnp
12:34 bjm900@r38 ~ > /apps/openmpi/1.10.2/bin/mpirun --mca plm_base_verbose 100
--mca ess_base_verbose 100 --mca ras_base_verbose 100 hostname
[r38:14454] mca: base: components_register: registering ess components
[r38:14454] mca: base: components_register: found loaded component hnp
[r38:14454] mca: base: components_register: component hnp has no register or
open function
[r38:14454] mca: base: components_register: found loaded component tm
[r38:14454] mca: base: components_register: component tm has no register or
open function
[r38:14454] mca: base: components_register: found loaded component singleton
[r38:14454] mca: base: components_register: component singleton register
function successful
[r38:14454] mca: base: components_register: found loaded component env
[r38:14454] mca: base: components_register: component env has no register or
open function
[r38:14454] mca: base: components_register: found loaded component tool
[r38:14454] mca: base: components_register: component tool has no register or
open function
[r38:14454] mca: base: components_open: opening ess components
[r38:14454] mca: base: components_open: found loaded component hnp
[r38:14454] mca: base: components_open: component hnp open function successful
[r38:14454] mca: base: components_open: found loaded component tm
[r38:14454] mca: base: components_open: component tm open function successful
[r38:14454] mca: base: components_open: found loaded component singleton
[r38:14454] mca: base: components_open: component singleton open function
successful
[r38:14454] mca: base: components_open: found loaded component env
[r38:14454] mca: base: components_open: component env open function successful
[r38:14454] mca: base: components_open: found loaded component tool
[r38:14454] mca: base: components_open: component tool open function successful
[r38:14454] mca:base:select: Auto-selecting ess components
[r38:14454] mca:base:select:( ess) Querying component [hnp]
[r38:14454] mca:base:select:( ess) Query of component [hnp] set priority to 100
[r38:14454] mca:base:select:( ess) Querying component [tm]
[r38:14454] mca:base:select:( ess) Skipping component [tm]. Query failed to
return a module
[r38:14454] mca:base:select:( ess) Querying component [singleton]
[r38:14454] mca:base:select:( ess) Skipping component [singleton]. Query
failed to return a module
[r38:14454] mca:base:select:( ess) Querying component [env]
[r38:14454] mca:base:select:( ess) Skipping component [env]. Query failed to
return a module
[r38:14454] mca:base:select:( ess) Querying component [tool]
[r38:14454] mca:base:select:( ess) Skipping component [tool]. Query failed to
return a module
[r38:14454] mca:base:select:( ess) Selected component [hnp]
[r38:14454] mca: base: close: component tm closed
[r38:14454] mca: base: close: unloading component tm
[r38:14454] mca: base: close: component singleton closed
[r38:14454] mca: base: close: unloading component singleton
[r38:14454] mca: base: close: component env closed
[r38:14454] mca: base: close: unloading component env
[r38:14454] mca: base: close: component tool closed
[r38:14454] mca: base: close: unloading component tool
[r38:14454] [[INVALID],INVALID] Topology Info:
[r38:14454] Type: Machine Number of child objects: 4
Name=NULL
total=33529896KB
DMIProductName="PRIMERGY CX250 S1"
DMIProductVersion="To be filled by O.E.M."
DMIBoardVendor=FUJITSU
DMIBoardName=D3196
DMIBoardVersion="S26361-D3196-A100 C3E"
DMIBoardAssetTag=3
DMIChassisVendor=FUJITSU
DMIChassisType=17
DMIChassisVersion=CX250S1R
DMIChassisAssetTag=3
DMIBIOSVendor=FUJITSU
DMIBIOSVersion="4.6.4 Rev.3B08.3196"
DMIBIOSDate=08/08/2012
DMISysVendor=FUJITSU
Backend=Linux
LinuxCgroup=/pbspro/4363271.r-man2
OSName=Linux
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OSVersion="#1 SMP Tue Dec 15 21:19:08 UTC 2015"
Architecture=x86_64
Cpuset: 0xffffffff
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Bind CPU proc: TRUE
Bind CPU thread: TRUE
Bind MEM proc: FALSE
Bind MEM thread: TRUE
Type: NUMANode Number of child objects: 1
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local=16752680KB
total=16752680KB
Cpuset: 0x00ff00ff
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CPUFamilyNumber=6
CPUModelNumber=45
CPUModel="Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz"
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linesize=64
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[r38:14454] mca: base: components_register: registering plm components
[r38:14454] mca: base: components_register: found loaded component rsh
[r38:14454] mca: base: components_register: component rsh register function
successful
[r38:14454] mca: base: components_register: found loaded component isolated
[r38:14454] mca: base: components_register: component isolated has no register
or open function
[r38:14454] mca: base: components_register: found loaded component tm
[r38:14454] mca: base: components_register: component tm register function
successful
[r38:14454] mca: base: components_open: opening plm components
[r38:14454] mca: base: components_open: found loaded component rsh
[r38:14454] mca: base: components_open: component rsh open function successful
[r38:14454] mca: base: components_open: found loaded component isolated
[r38:14454] mca: base: components_open: component isolated open function
successful
[r38:14454] mca: base: components_open: found loaded component tm
[r38:14454] mca: base: components_open: component tm open function successful
[r38:14454] mca:base:select: Auto-selecting plm components
[r38:14454] mca:base:select:( plm) Querying component [rsh]
[r38:14454] mca:base:select:( plm) Query of component [rsh] set priority to 10
[r38:14454] mca:base:select:( plm) Querying component [isolated]
[r38:14454] mca:base:select:( plm) Query of component [isolated] set priority
to 0
[r38:14454] mca:base:select:( plm) Querying component [tm]
[r38:14454] mca:base:select:( plm) Query of component [tm] set priority to 75
[r38:14454] mca:base:select:( plm) Selected component [tm]
[r38:14454] mca: base: close: component rsh closed
[r38:14454] mca: base: close: unloading component rsh
[r38:14454] mca: base: close: component isolated closed
[r38:14454] mca: base: close: unloading component isolated
[r38:14454] mca: base: components_register: registering ras components
[r38:14454] mca: base: components_register: found loaded component simulator
[r38:14454] mca: base: components_register: component simulator register
function successful
[r38:14454] mca: base: components_register: found loaded component tm
[r38:14454] mca: base: components_register: component tm register function
successful
[r38:14454] mca: base: components_open: opening ras components
[r38:14454] mca: base: components_open: found loaded component simulator
[r38:14454] mca: base: components_open: found loaded component tm
[r38:14454] mca: base: components_open: component tm open function successful
[r38:14454] mca:base:select: Auto-selecting ras components
[r38:14454] mca:base:select:( ras) Querying component [simulator]
[r38:14454] mca:base:select:( ras) Skipping component [simulator]. Query
failed to return a module
[r38:14454] mca:base:select:( ras) Querying component [tm]
[r38:14454] mca:base:select:( ras) Query of component [tm] set priority to 100
[r38:14454] mca:base:select:( ras) Selected component [tm]
[r38:14454] mca: base: close: unloading component simulator
====================== ALLOCATED NODES ======================
r38: slots=16 max_slots=0 slots_inuse=0 state=UP
r43: slots=16 max_slots=0 slots_inuse=0 state=UP
=================================================================
[r43:04935] mca: base: components_register: registering ess components
[r43:04935] mca: base: components_register: found loaded component tm
[r43:04935] mca: base: components_register: component tm has no register or
open function
[r43:04935] mca: base: components_open: opening ess components
[r43:04935] mca: base: components_open: found loaded component tm
[r43:04935] mca: base: components_open: component tm open function successful
[r43:04935] mca:base:select: Auto-selecting ess components
[r43:04935] mca:base:select:( ess) Querying component [tm]
[r43:04935] mca:base:select:( ess) Query of component [tm] set priority to 30
[r43:04935] mca:base:select:( ess) Selected component [tm]
[r43:04935] [[16883,0],1] Topology Info:
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Cpuset: 0x80008000
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Allowed: 0x80008000
Type: Core Number of child
objects: 2
Name=NULL
Cpuset: 0x80008000
Online: 0x80008000
Allowed: 0x80008000
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x00008000
Online:
0x00008000
Allowed:
0x00008000
Type: PU Number of
child objects: 0
Name=NULL
Cpuset:
0x80000000
Online:
0x80000000
Allowed:
0x80000000
Type: Bridge Host->PCI Number of child objects: 5
Name=NULL
buses=0000:[00-6f]
Type: PCI 8086:1521 Number of child objects: 0
Name=NULL
busid=0000:20:00.0
class=0200(Ether)
Type: PCI 8086:1521 Number of child objects: 0
Name=NULL
busid=0000:20:00.1
class=0200(Ether)
Type: PCI 8086:1d6b Number of child objects: 1
Name=NULL
busid=0000:40:00.0
class=0107(SAS)
Type: Block Number of child objects: 0
Name=sda
Type: PCI 1a03:2000 Number of child objects: 0
Name=NULL
busid=0000:51:00.0
class=0300(VGA)
Type: PCI 8086:1d02 Number of child objects: 0
Name=NULL
busid=0000:00:1f.2
class=0106(SATA)
Type: Bridge Host->PCI Number of child objects: 1
Name=NULL
buses=0000:[80-b3]
Type: PCI 15b3:1003 Number of child objects: 2
Name=NULL
busid=0000:b0:00.0
class=0280(Net)
Type: Network Number of child objects: 0
Name=ib0
Address=a0:00:01:00:fe:80:00:00:00:00:00:00:00:02:c9:03:00:17:e9:61
Port=1
Type: OpenFabrics Number of child objects: 0
Name=mlx4_0
NodeGUID=0002:c903:0017:e960
SysImageGUID=0002:c903:0017:e963
Port1State=4
Port1LID=0x106e
Port1LMC=0
Port1GID0=fe80:0000:0000:0000:0002:c903:0017:e961
[r38:14454] [[16883,0],0] plm:base:receive update proc state command from
[[16883,0],1]
[r38:14454] [[16883,0],0] plm:base:receive got update_proc_state for job
[16883,1]
r38
r38
r38
r38
r38
r38
r38
r38
r38
r38
r38
r38
r38
r38
r38
r38
r43
r43
r43
r43
r43
r43
r43
r43
r43
r43
r43
r43
r43
r43
r43
r43
[r38:14454] [[16883,0],0] plm:base:receive update proc state command from
[[16883,0],1]
[r38:14454] [[16883,0],0] plm:base:receive got update_proc_state for job
[16883,1]
[r43:04935] mca: base: close: component tm closed
[r43:04935] mca: base: close: unloading component tm
[r38:14454] mca: base: close: unloading component tm
[r38:14454] mca: base: close: component tm closed
[r38:14454] mca: base: close: unloading component tm
[r38:14454] mca: base: close: component hnp closed
[r38:14454] mca: base: close: unloading component hnp
