Hi, Building with --disable-pmix-dstore, my program now works fine inside and outside the containers. When/if I have the time, I will investigate the "shared memory segments" aspects.
Thanks, John On Fri, 2017-05-26 at 15:23 -0700, r...@open-mpi.org wrote: You can also get around it by configuring OMPI with “--disable-pmix-dstore” On May 26, 2017, at 3:02 PM, Howard Pritchard <hpprit...@gmail.com<mailto:hpprit...@gmail.com>> wrote: Hi John, In the 2.1.x release stream a shared memory capability was introduced into the PMIx component. I know nothing about LXC containers, but it looks to me like there's some issue when PMIx tries to create these shared memory segments. I'd check to see if there's something about your container configuration that is preventing the creation of shared memory segments. Howard 2017-05-26 15:18 GMT-06:00 John Marshall <john.marsh...@ssc-spc.gc.ca<mailto:john.marsh...@ssc-spc.gc.ca>>: Hi, I have built openmpi 2.1.1 with hpcx-1.8 and tried to run some mpi code under ubuntu 14.04 and LXC (1.x) but I get the following: [ib7-bc2oo42-be10p16.science.gc.ca:16035<http://ib7-bc2oo42-be10p16.science.gc.ca:16035/>] PMIX ERROR: OUT-OF-RESOURCE in file src/dstore/pmix_esh.c at line 1651 [ib7-bc2oo42-be10p16.science.gc.ca:16035<http://ib7-bc2oo42-be10p16.science.gc.ca:16035/>] PMIX ERROR: OUT-OF-RESOURCE in file src/dstore/pmix_esh.c at line 1751 [ib7-bc2oo42-be10p16.science.gc.ca:16035<http://ib7-bc2oo42-be10p16.science.gc.ca:16035/>] PMIX ERROR: OUT-OF-RESOURCE in file src/dstore/pmix_esh.c at line 1114 [ib7-bc2oo42-be10p16.science.gc.ca:16035<http://ib7-bc2oo42-be10p16.science.gc.ca:16035/>] PMIX ERROR: OUT-OF-RESOURCE in file src/common/pmix_jobdata.c at line 93 [ib7-bc2oo42-be10p16.science.gc.ca:16035<http://ib7-bc2oo42-be10p16.science.gc.ca:16035/>] PMIX ERROR: OUT-OF-RESOURCE in file src/common/pmix_jobdata.c at line 333 [ib7-bc2oo42-be10p16.science.gc.ca:16035<http://ib7-bc2oo42-be10p16.science.gc.ca:16035/>] PMIX ERROR: OUT-OF-RESOURCE in file src/server/pmix_server.c at line 606 I do not get the same outside of the LXC container and my code runs fine. I've looked for more info on these messages but could not find anything helpful. Are these messages indicative of something missing in, or some incompatibility with, the container? When I build using 2.0.2, I do not have a problem running inside or outside of the container. Thanks, John _______________________________________________ users mailing list users@lists.open-mpi.org<mailto:users@lists.open-mpi.org> https://rfd.newmexicoconsortium.org/mailman/listinfo/users _______________________________________________ users mailing list users@lists.open-mpi.org<mailto:users@lists.open-mpi.org> https://rfd.newmexicoconsortium.org/mailman/listinfo/users _______________________________________________ users mailing list users@lists.open-mpi.org<mailto:users@lists.open-mpi.org> https://rfd.newmexicoconsortium.org/mailman/listinfo/users
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