HI Adam, Sorry didn't notice you did try the --enable-debug flag. That should not have led to the link error building the opal dso. Did you do a make clean after rerunning configure?
Howard 2018-05-04 8:22 GMT-06:00 Howard Pritchard <hpprit...@gmail.com>: > Hi Adam, > > Did you try using the --enable-debug configure option along with your > CFLAGS options? > You may want to see if that simplifies your build. > > In any case, we'll fix the problems you found. > > Howard > > > 2018-05-03 15:00 GMT-06:00 Moody, Adam T. <mood...@llnl.gov>: > >> Hello Open MPI team, >> >> I'm looking for the recommended way to produce a debug build of Open MPI >> v3.0.1 that compiles with “-g -O0” so that I get accurate debug info under >> a debugger. >> >> So far, I've gone through the following sequence. I started with >> CFLAGS="-g -O0" on make: >> >> shell$ ./configure --prefix=$installdir --disable-silent-rules \ >> >> --disable-new-dtags --enable-mpi-cxx --enable-cxx-exceptions --with-pmi >> >> shell$ make -j CFLAGS="-g -O0" VERBOSE=1 >> >> That led to the following error: >> >> In file included from ../../../../opal/util/arch.h:26:0, >> >> from btl_openib.h:43, >> >> from btl_openib_component.c:79: >> >> btl_openib_component.c: In function 'progress_pending_frags_wqe': >> >> btl_openib_component.c:3351:29: error: 'opal_list_item_t' has no member >> named 'opal_list_item_refcount' >> >> assert(0 == frag->opal_list_item_refcount); >> >> ^ >> >> make[2]: *** [btl_openib_component.lo] Error 1 >> >> make[2]: *** Waiting for unfinished jobs.... >> >> make[2]: Leaving directory `.../openmpi-3.0.1/opal/mca/btl/openib' >> >> So it seems the assert is referring to a field structure that is >> protected by a debug flag. I then added --enable-debug to configure, which >> led to: >> >> make[2]: Entering directory `.../openmpi-3.0.1/opal/tools/wrappers' >> >> CC opal_wrapper.o >> >> GENERATE opal_wrapper.1 >> >> CCLD opal_wrapper >> >> ../../../opal/.libs/libopen-pal.so: undefined reference to `pthread_atfork' >> >> collect2: error: ld returned 1 exit status >> >> make[2]: *** [opal_wrapper] Error 1 >> >> make[2]: Leaving directory `.../openmpi-3.0.1/opal/tools/wrappers' >> >> Finally, if I also add LDFLAGS="-lpthread" to make, I get a build: >> >> shell$ ./configure --prefix=$installdir --enable-debug >> --disable-silent-rules \ >> >> --disable-new-dtags --enable-mpi-cxx --enable-cxx-exceptions --with-pmi >> >> shell$ make -j CFLAGS="-g -O0" LDFLAGS="-lpthread" VERBOSE=1 >> >> Am I doing this correctly? >> >> Is there a pointer to the configure/make flags for this? >> >> I did find this page that describes the developer build from a git clone, >> but that seemed a bit overkill since I am looking for a debug build from >> the distribution tarball instead of the git clone (avoid the autotools >> nightmare): >> >> https://www.open-mpi.org/source/building.php >> >> Thanks. >> >> -Adam >> >> _______________________________________________ >> users mailing list >> users@lists.open-mpi.org >> https://lists.open-mpi.org/mailman/listinfo/users >> > >
_______________________________________________ users mailing list users@lists.open-mpi.org https://lists.open-mpi.org/mailman/listinfo/users
