Hi Gus, Thanks for the suggestions. The correct version of openmpi seems to be getting picked up; I also prepended .bashrc with the installation path like you suggested, but it didn't seemed to help:
user@b09-30:~$ cat .bashrc export PATH=/home/user/openmpi_install/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin export LD_LIBRARY_PATH=/home/user/openmpi_install/lib user@b09-30:~$ which mpicc /home/user/openmpi_install/bin/mpicc user@b09-30:~$ /usr/bin/ssh -x b09-32 orted [b09-32:204536] [[INVALID],INVALID] ORTE_ERROR_LOG: Not found in file ess_env_module.c at line 147 [b09-32:204536] [[INVALID],INVALID] ORTE_ERROR_LOG: Bad parameter in file util/session_dir.c at line 106 [b09-32:204536] [[INVALID],INVALID] ORTE_ERROR_LOG: Bad parameter in file util/session_dir.c at line 345 [b09-32:204536] [[INVALID],INVALID] ORTE_ERROR_LOG: Bad parameter in file base/ess_base_std_orted.c at line 270 -------------------------------------------------------------------------- It looks like orte_init failed for some reason; your parallel process is likely to abort. There are many reasons that a parallel process can fail during orte_init; some of which are due to configuration or environment problems. This failure appears to be an internal failure; here's some additional information (which may only be relevant to an Open MPI developer): orte_session_dir failed --> Returned value Bad parameter (-5) instead of ORTE_SUCCESS -------------------------------------------------------------------------- Thanks, Max On Mon, May 14, 2018 at 11:41 AM, Gus Correa <g...@ldeo.columbia.edu> wrote: > Hi Max > > Just in case, as environment mix often happens. > Could it be that you are inadvertently picking another > installation of OpenMPI, perhaps installed from packages > in /usr , or /usr/local? > That's easy to check with 'which mpiexec' or > 'which mpicc', for instance. > > Have you tried to prepend (as opposed to append) OpenMPI > to your PATH? Say: > > export PATH='/home/user/openmpi_install/bin:/usr/local/sbin:/usr/ > local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/ > local/games:/snap/bin' > > I hope this helps, > Gus Correa >
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