Dear James, did you make sure to clean everything before move from CUDA 5.5 to CUDA 6.5?
Meaning: $ make -f Makefile.gpu distclean and re-run the configure from GPU/ folder. What happen if you disable MAGMA? Does it compile? -- Mr. Filippo SPIGA, M.Sc. Quantum ESPRESSO Foundation http://www.quantum-espresso.org ~ skype: filippo.spiga ***** Disclaimer: "Please note this message and any attachments are CONFIDENTIAL and may be privileged or otherwise protected from disclosure. The contents are not to be disclosed to anyone other than the addressee. Unauthorized recipients are requested to preserve this confidentiality and to advise the sender immediately of any error in transmission." On Feb 17, 2016, at 7:11 PM, Ianni, James C CTR USARMY RDECOM ARL (US) <james.c.ianni....@mail.mil> wrote: > CLASSIFICATION: UNCLASSIFIED > > > Hi, > > I'm trying to compile QE-GPU-5.3.0 on a 64-bit SUSE Linux Sever 11.3 Dell > node. I'm compiling with gcc/4.8.1 with cudatoolkit/6.5.14-1.0502.9613.6.1. I > have successfully compiled QE-GPU-5.3.0 with > cudatoolkit/5.5.22-1.0502.7944.3.1 before, but that version does not run with > the newer cudatoolkit installed. > The compilation problems appears to be missing BLAS libraries (see output > from below) that MAGMA is trying to call. Could it be that the cudatoolkit > wasn't fully installed? > === > > Here is my configure: > > export ARCH x86_64 > export F77="gfortran -fPIC" > export FC="gfortran -fPIC" > export CC="gcc -fPIC" > > ./configure --disable-parallel --enable-openmp \ > --enable-cuda --with-gpu-arch=sm_35 \ > --with-cuda-dir=/opt/cray/nvidia/default/lib64 \ > --with-magma --with-phigemm > --prefix=/usr/cta/unsupported/qe/5.3.0.gpu/espresso-5.3.0 > > ======== > <..SNIP..> > .. > gfortran -fPIC -g -fopenmp -o pw-gpu.x \ > pwscf.o ../../PW/src/libpw.a libpwgpu.a ../../Modules/libqemod.a > ../../FFTXlib/libqefft.a ../Modules/libqemodgpu.a ../../flib/ptools.a > ../../flib/flib.a ../../clib/clib.a ../../iotk/src/libiotk.a > /usr/cta/unsupported/qe/5.3.0.gpu/espresso-5.3.0/GPU/..//qe-magma/lib/libmagma.a > > /usr/cta/unsupported/qe/5.3.0.gpu/espresso-5.3.0/GPU/..//lapack-3.2/lapack.a > /usr/cta/unsupported/qe/5.3.0.gpu/espresso-5.3.0/GPU/..//phiGEMM/lib/libphigemm.a > /usr/cta/unsupported/qe/5.3.0.gpu/espresso-5.3.0/GPU/..//BLAS/blas.a > -L/opt/nvidia/cudatoolkit6.5/6.5.14-1.0502.9613.6.1/lib64 -lcublas -lcufft > -lcudart > /usr/cta/unsupported/qe/5.3.0.gpu/espresso-5.3.0/GPU/..//qe-magma/lib/libmagma.a(zgeqp3.o): > In function `magma_zgeqp3': > zgeqp3.cpp:(.text+0x33f): undefined reference to `cblas_dznrm2' > /usr/cta/unsupported/qe/5.3.0.gpu/espresso-5.3.0/GPU/..//qe-magma/lib/libmagma.a(zlaqps.o): > In function `magma_zlaqps': > zlaqps.cpp:(.text+0x207): undefined reference to `cblas_idamax' > zlaqps.cpp:(.text+0x97c): undefined reference to `cblas_dznrm2' > zlaqps.cpp:(.text+0xa15): undefined reference to `cblas_dznrm2' > .. > <..SNIP..> > ______________________________ > Dr. James C. Ianni > Applications Engineer > Lockheed-Martin / Contractor > ARL DoD Supercomputing Resource Center > Aberdeen Proving Ground, MD 21005 > Email: james.c.ianni....@mail.mil > > > > CLASSIFICATION: UNCLASSIFIED > _______________________________________________ > Pw_forum mailing list > Pw_forum@pwscf.org > http://pwscf.org/mailman/listinfo/pw_forum _______________________________________________ Pw_forum mailing list Pw_forum@pwscf.org http://pwscf.org/mailman/listinfo/pw_forum
