On 11/3/2014 2:52 PM, Christopher Schultz wrote:
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Mark,
On 11/3/14 2:41 PM, Mark Maciolek wrote:
On 11/3/2014 2:29 PM, Daniel Mikusa wrote:
On Mon, Nov 3, 2014 at 1:58 PM, Mark Maciolek <m...@sr.unh.edu>
wrote:
hi,
system is running Scientific Linux release 6.5 rpm installed
tomcat6-servlet-2.5-api-6.0.24-78.el6_5.noarch
tomcat6-javadoc-6.0.24-78.el6_5.noarch
tomcat6-lib-6.0.24-78.el6_5.noarch
tomcat-native-1.1.30-1.el6.x86_64
tomcat6-el-2.1-api-6.0.24-78.el6_5.noarch
tomcat6-admin-webapps-6.0.24-78.el6_5.noarch
apache-tomcat-apis-0.1-1.el6.noarch
tomcat6-jsp-2.1-api-6.0.24-78.el6_5.noarch
tomcat6-webapps-6.0.24-78.el6_5.noarch
tomcat-servlet-3.0-api-7.0.33-4.el6.noarch
tomcat6-6.0.24-78.el6_5.noarch
tomcat6-docs-webapp-6.0.24-78.el6_5.noarch
For what it's worth, 6.0.24 is pretty old. You should strongly
consider upgrading to 6.0.41, or whatever is the latest at the
time you go to upgrade.
httpd-2.2.15-31.sl6.x86_64
tomcat starts and I can reach the page on the 8080 port
Good!
It never starts the connection host name connection from the
server.xml
Hmm, not sure what you mean here. Are you talking about virtual
hosting with Tomcat?
http://tomcat.apache.org/tomcat-6.0-doc/virtual-hosting-howto.html
not currently just this one site on the server serving jsp file.
I do a kill -3 on the tomcat pid and this is what the logs
shows:
INFO: Starting Servlet Engine: Apache Tomcat/6.0.24 Nov 3, 2014
1:19:10 PM org.apache.catalina.startup.HostConfig
deployDescriptor INFO: Deploying configuration descriptor
host-manager.xml Nov 3, 2014 1:19:10 PM
org.apache.catalina.startup.HostConfig deployDescriptor INFO:
Deploying configuration descriptor manager.xml Nov 3, 2014
1:19:10 PM org.apache.catalina.startup.HostConfig
deployDirectory INFO: Deploying web application directory ROOT
Nov 3, 2014 1:19:10 PM org.apache.catalina.startup.HostConfig
deployDirectory INFO: Deploying web application directory
examples Nov 3, 2014 1:19:11 PM
org.apache.catalina.startup.HostConfig deployDirectory INFO:
Deploying web application directory sample Nov 3, 2014 1:19:11
PM org.apache.catalina.startup.HostConfig deployDirectory INFO:
Deploying web application directory docs Nov 3, 2014 1:19:11 PM
org.apache.coyote.http11.Http11Protocol start INFO: Starting
Coyote HTTP/1.1 on http-8080 Nov 3, 2014 1:19:11 PM
org.apache.jk.common.ChannelSocket init INFO: JK: ajp13
listening on /0.0.0.0:8009 Nov 3, 2014 1:19:11 PM
org.apache.jk.server.JkMain start INFO: Jk running ID=0
time=0/54 config=null Nov 3, 2014 1:19:11 PM
org.apache.catalina.startup.Catalina start INFO: Server startup
in 1307 ms 2014-11-03 13:19:37 Full thread dump OpenJDK 64-Bit
Server VM (23.25-b01 mixed mode):
"TP-Monitor" daemon prio=10 tid=0x00007feca454d800 nid=0x729f
in Object.wait() [0x00007feca2410000] java.lang.Thread.State:
TIMED_WAITING (on object monitor) at
java.lang.Object.wait(Native Method) - waiting on
<0x00000000ba74ea78> (a org.apache.tomcat.util.
threads.ThreadPool$MonitorRunnable) at
org.apache.tomcat.util.threads.ThreadPool$MonitorRunnable.run(
ThreadPool.java:565) - locked <0x00000000ba74ea78> (a
org.apache.tomcat.util. threads.ThreadPool$MonitorRunnable) at
java.lang.Thread.run(Thread.java:701)
"TP-Processor4" daemon prio=10 tid=0x00007feca452f000
nid=0x729e runnable [0x00007feca2511000]
java.lang.Thread.State: RUNNABLE at
java.net.PlainSocketImpl.socketAccept(Native Method) at
java.net.AbstractPlainSocketImpl.accept(
AbstractPlainSocketImpl.java:375) at
java.net.ServerSocket.implAccept(ServerSocket.java:478) at
java.net.ServerSocket.accept(ServerSocket.java:446) at
org.apache.jk.common.ChannelSocket.accept(
ChannelSocket.java:307) at
org.apache.jk.common.ChannelSocket.acceptConnections(
ChannelSocket.java:661) at
org.apache.jk.common.ChannelSocket$SocketAcceptor.
runIt(ChannelSocket.java:872) at
org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(
ThreadPool.java:690) at java.lang.Thread.run(Thread.java:701)
"TP-Processor3" daemon prio=10 tid=0x00007feca452d000
nid=0x729d in Object.wait() [0x00007feca2612000]
java.lang.Thread.State: WAITING (on object monitor) at
java.lang.Object.wait(Native Method) - waiting on
<0x00000000ba74e3a8> (a org.apache.tomcat.util.
threads.ThreadPool$ControlRunnable) at
java.lang.Object.wait(Object.java:502) at
org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(
ThreadPool.java:662) - locked <0x00000000ba74e3a8> (a
org.apache.tomcat.util. threads.ThreadPool$ControlRunnable) at
java.lang.Thread.run(Thread.java:701)
"TP-Processor2" daemon prio=10 tid=0x00007feca4532000
nid=0x729c in Object.wait() [0x00007feca2713000]
java.lang.Thread.State: WAITING (on object monitor) at
java.lang.Object.wait(Native Method) - waiting on
<0x00000000ba74e010> (a org.apache.tomcat.util.
threads.ThreadPool$ControlRunnable) at
java.lang.Object.wait(Object.java:502) at
org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(
ThreadPool.java:662) - locked <0x00000000ba74e010> (a
org.apache.tomcat.util. threads.ThreadPool$ControlRunnable) at
java.lang.Thread.run(Thread.java:701)
"TP-Processor1" daemon prio=10 tid=0x00007feca452a000
nid=0x729b in Object.wait() [0x00007feca2814000]
java.lang.Thread.State: WAITING (on object monitor) at
java.lang.Object.wait(Native Method) - waiting on
<0x00000000ba74dc60> (a org.apache.tomcat.util.
threads.ThreadPool$ControlRunnable) at
java.lang.Object.wait(Object.java:502) at
org.apache.tomcat.util.threads.ThreadPool$ControlRunnable.run(
ThreadPool.java:662) - locked <0x00000000ba74dc60> (a
org.apache.tomcat.util. threads.ThreadPool$ControlRunnable) at
java.lang.Thread.run(Thread.java:701)
"http-8080-Acceptor-0" daemon prio=10 tid=0x00007feca44fb000
nid=0x7299 runnable [0x00007feca2915000]
java.lang.Thread.State: RUNNABLE at
java.net.PlainSocketImpl.socketAccept(Native Method) at
java.net.AbstractPlainSocketImpl.accept(
AbstractPlainSocketImpl.java:375) at
java.net.ServerSocket.implAccept(ServerSocket.java:478) at
java.net.ServerSocket.accept(ServerSocket.java:446) at
org.apache.tomcat.util.net.DefaultServerSocketFactory.
acceptSocket(DefaultServerSocketFactory.java:61) at
org.apache.tomcat.util.net.JIoEndpoint$Acceptor.run(
JIoEndpoint.java:352) at java.lang.Thread.run(Thread.java:701)
"ContainerBackgroundProcessor[StandardEngine[Catalina]]" daemon
prio=10 tid=0x00007feca4501000 nid=0x7298 waiting on condition
[0x00007feca2a16000] java.lang.Thread.State: TIMED_WAITING
(sleeping) at java.lang.Thread.sleep(Native Method) at
org.apache.catalina.core.ContainerBase$
ContainerBackgroundProcessor.run(ContainerBase.java:1579) at
java.lang.Thread.run(Thread.java:701)
"GC Daemon" daemon prio=10 tid=0x00007feca440e800 nid=0x7297
in Object.wait() [0x00007feca2d2d000] java.lang.Thread.State:
TIMED_WAITING (on object monitor) at
java.lang.Object.wait(Native Method) - waiting on
<0x00000000cdd49190> (a sun.misc.GC$LatencyLock) at
sun.misc.GC$Daemon.run(GC.java:117) - locked
<0x00000000cdd49190> (a sun.misc.GC$LatencyLock)
"Low Memory Detector" daemon prio=10 tid=0x00007feca40f0000
nid=0x7295 runnable [0x0000000000000000]
java.lang.Thread.State: RUNNABLE
"C2 CompilerThread1" daemon prio=10 tid=0x00007feca40ed800
nid=0x7294 waiting on condition [0x0000000000000000]
java.lang.Thread.State: RUNNABLE
"C2 CompilerThread0" daemon prio=10 tid=0x00007feca40eb000
nid=0x7293 waiting on condition [0x0000000000000000]
java.lang.Thread.State: RUNNABLE
"Signal Dispatcher" daemon prio=10 tid=0x00007feca40e9000
nid=0x7292 waiting on condition [0x0000000000000000]
java.lang.Thread.State: RUNNABLE
"Finalizer" daemon prio=10 tid=0x00007feca409a800 nid=0x7291
in Object.wait() [0x00007feca3c65000] java.lang.Thread.State:
WAITING (on object monitor) at java.lang.Object.wait(Native
Method) - waiting on <0x00000000cdb55a98> (a
java.lang.ref.ReferenceQueue$ Lock) at
java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:133) -
locked <0x00000000cdb55a98> (a java.lang.ref.ReferenceQueue$
Lock) at
java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:149)
at
java.lang.ref.Finalizer$FinalizerThread.run(Finalizer.java:189)
"Reference Handler" daemon prio=10 tid=0x00007feca4098800 nid=0x7290 in
Object.wait() [0x00007feca3d66000] java.lang.Thread.State:
WAITING (on object monitor) at java.lang.Object.wait(Native
Method) - waiting on <0x00000000cdb557c8> (a
java.lang.ref.Reference$Lock) at
java.lang.Object.wait(Object.java:502) at
java.lang.ref.Reference$ReferenceHandler.run(
Reference.java:133) - locked <0x00000000cdb557c8> (a
java.lang.ref.Reference$Lock)
"main" prio=10 tid=0x00007feca4009000 nid=0x728d runnable
[0x00007fecabf19000] java.lang.Thread.State: RUNNABLE at
java.net.PlainSocketImpl.socketAccept(Native Method) at
java.net.AbstractPlainSocketImpl.accept(
AbstractPlainSocketImpl.java:375) at
java.net.ServerSocket.implAccept(ServerSocket.java:478) at
java.net.ServerSocket.accept(ServerSocket.java:446) at
org.apache.catalina.core.StandardServer.await(
StandardServer.java:389) at
org.apache.catalina.startup.Catalina.await(Catalina.java:657)
at
org.apache.catalina.startup.Catalina.start(Catalina.java:617)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(
NativeMethodAccessorImpl.java:57) at
sun.reflect.DelegatingMethodAccessorImpl.invoke(
DelegatingMethodAccessorImpl.java:43) at
java.lang.reflect.Method.invoke(Method.java:622) at
org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289)
at
org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414)
"VM Thread" prio=10 tid=0x00007feca4089800 nid=0x728f runnable
"VM Periodic Task Thread" prio=10 tid=0x00007feca40fb000
nid=0x7296 waiting on condition
JNI global references: 231
Heap def new generation total 18432K, used 13769K
[0x00000000b9c00000, 0x00000000bb000000, 0x00000000cdb50000)
eden space 16384K, 74% used [0x00000000b9c00000,
0x00000000ba7f1588, 0x00000000bac00000) from space 2048K, 75%
used [0x00000000bae00000, 0x00000000baf81118,
0x00000000bb000000) to space 2048K, 0% used
[0x00000000bac00000, 0x00000000bac00000, 0x00000000bae00000)
tenured generation total 40896K, used 2039K
[0x00000000cdb50000, 0x00000000d0340000, 0x00000000f5a00000)
the space 40896K, 4% used [0x00000000cdb50000,
0x00000000cdd4df20, 0x00000000cdd4e000, 0x00000000d0340000)
compacting perm gen total 21248K, used 12267K
[0x00000000f5a00000, 0x00000000f6ec0000, 0x0000000100000000)
the space 21248K, 57% used [0x00000000f5a00000,
0x00000000f65faf88, 0x00000000f65fb000, 0x00000000f6ec0000) No
shared spaces configured.
Is the issue with the No shared spaces configured or is it
more likely the java code being called to make the startup
connection?
Any pointers in how to troubleshoot this problem would be
greatly appreciated.
It's not really clear what's failing here. Can you be more
specific about what isn't working? Perhaps provide an example of
what fails and what you expect should happen.
Dan
On a working server with similar setup this is what shows in the
catalina.out log
2014-11-03 11:34:59 Config Instatiated: {OS_OWNER=ag,
TOMCAT_GROUP=tomcat, DB_USER=dbuser, SUPPORT_PHONE=603-862-0348,
BASE_PATH=/data1/picturepost, TOMCAT_HOME=/usr/share/tomcat6,
MAP_FILE=/data1/picturepost/cgi-bin/modis.map,
CONVERT=/usr/bin/convert, DB_PORT=5432,
GOOGLE_MAPS_KEY=ABQIAAAAXLtB9cZEiOZ_WJC3vUyI2RQG0VXM1isChuPqZL77qjLf3s1C-hSFtmTt8t6XLAWqQA-40gXr1h4CJg,
PICTURE_DIR=/data1/picturepost/data/pictures, APACHE_GROUP=apache,
MAX_FILE_UPLOAD_SIZE=10485760, MAX_DB_CONNECTION_TIME=120,
PICTURE_DIR_URL=/images/pictures,
APACHE_SERVER_NAME=picturepost.unh.edu,
SUPPORT_EMAIL=picturepostsupp...@picturepost.unh.edu,
HOST=/data1/picturepost/logs/picturepost.log,
DOCUMENT_ROOT_DIR=/data1/picturepost/webapps/ROOT,
DB_PASSWORD=n0rMal1, DB_ADMIN_USER=postgres, MODE=live,
NUM_DB_CONNECTIONS=20, URL=http://picturepost.unh.edu,
NAME=picturepost, LOG=/data1/picturepost/logs/picturepost.log,
RECAPTCHA_PUBLIC_KEY=6Lckb8USAAAAAPU_hxR1X6lmNXO1goLP_vLPGlnF,
DB_HOST_IP=127.0.0.1,
LAYERS_FILE=/data1/picturepost/cgi-bin/modis_layers.map,
DATABASE=picturepost, PHPBB_PTA_SECRET=PAGoJcPsNJuN0GsjuOZpB,
DB_ADMIN_PASSWORD=,
RECAPTCHA_PRIVATE_KEY=6Lckb8USAAAAAAPOLqa9bls_ss80YStO5PyPseVK,
OS_GROUP=users, APACHE_ADDR_PORT=*:80,
CONFIG_FILE=/data1/picturepost/config/picturepost.cfg,
EMAIL_COMMAND=/usr/sbin/sendmail -oi -t}
I've never seen anything like that ever before. Is that some custom
component that is generating that logging?
yes, the programmer not I made a custom Log.class
So on the server that is not working I never see the Config
Instatiated
<Host name="centaur.sr.unh.edu" appBase="/web/opal/webapps">
<Context docBase="ROOT" path="" allowLinking="true"> <Parameter
name="BASE_PATH" value="/web/opal"/> </Context>
The above is probably going to double-deploy your web application or
otherwise do something weird. Don't put your <Context> in server.xml.
Instead, declare the <Context> element in your web application's
META-INF/context.xml file, where you can put things like your
BASE_PATH parameter.
</Host>
We leaning towards something wrong in the StartupCooa.java file
but since I never see the attempt to startup the config in the
catalina.out file I suspect some else might be wrong.
I've never heard of StartupCooa.java.
This is the file the web programmer compiled from the class files, so it
is unique to our server.
it is in the web.xml file for the host as a servlet.
Mark
- -chris
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Mark Maciolek
Network Administrator
Morse Hall Room 339
603-862-3050
https://www.unh.edu/research/support-units/research-computing-center
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