Are you able to run the same code in SPARK_HOME/bin/spark-shell?
Thanks,
moon
On Thu, Nov 17, 2016 at 9:47 AM Muhammad Rezaul Karim <reza_cse...@yahoo.com>
wrote:
> Hi,
>
> Thanks a lot. Yes, I have removed the metastore_db directory too.
>
>
>
>
> On Thursday, November 17, 2016 5:38 PM, moon soo Lee <m...@apache.org>
> wrote:
>
>
> Although "export PATH=$PATH..." is not really necessary in
> zeppelin-env.sh, i think your configuration looks okay.
>
> Have you tried remove /home/asif/zeppelin-0.6.2-bin-all/metastore_db ?
>
> Thanks,
> moon
>
> On Wed, Nov 16, 2016 at 6:48 PM Muhammad Rezaul Karim <
> reza_cse...@yahoo.com> wrote:
>
> Hi Moon,
>
> I have set those variables as follows (a partial view of the zeppelin-env.sh
> file). Is this okay?
>
> #!/bin/bash
> export JAVA_HOME=/usr/lib/jvm/java-8-oracle
> export PATH=$PATH:$JAVA_HOME/bin
>
> export SPARK_HOME=/home/asif/spark-2.0.0-bin-hadoop2.7
> export PATH=$PATH:$SPARK_HOME/bin
>
> # Options read in YARN client mode
> export HADOOP_CONF_DIR=/home/asif/Downloads/hadoop-2.7.3/etc
> export PATH=$PATH:$HADOOP_CONF_DIR/hadoop
>
>
>
>
> On Thursday, November 17, 2016 1:45 AM, Md. Rezaul Karim <
> reza_cse...@yahoo.com> wrote:
>
>
> Hi Moon,
> No, I did not set those two environmental variables. I'm still how to do
> that. I have installed Spark on my machine and have set the SPARK_HOME.
> However, do I also need to install and configure the Hadoop. But the error
> is all about the Hive. Am I some how wrong?
> A sample zeppelin-env.sh file would be very helpful.
>
> On Nov 16, 2016 10:47 PM, moon soo Lee <m...@apache.org> wrote:
>
> Hi,
>
> It's strange,
> Do you have SPARK_HOME or HADOOP_CONF_DIR defined in conf/zeppelin-env.sh?
>
> You can stop Zeppelin, delete /home/asif/zeppelin-0.6.2-bin-all/metastore_db,
> start Zeppelin and try again.
>
> Thanks,
> moon
>
> On Tue, Nov 15, 2016 at 4:05 PM Muhammad Rezaul Karim <
> reza_cse...@yahoo.com> wrote:
>
>
>
>
> Hi,
> I am a new user of Apache Zeppelin and I am running a simple notebook app
> on Zeppelin (version 0.6.2-bin-all) using Scala based on Spark.
>
> My source code is as follows:
>
> val bankText =
> sc.textFile("/home/rezkar/zeppelin-0.6.2-bin-all/bin/bank-full.csv")
> case class Bank(age:String, job:String, marital:String, education:String,
> balance:String)
> val bank = bankText.map(s=>s.split(";")).map(
> s=>Bank(s(0),
> s(1).replaceAll("\"", ""),
> s(2).replaceAll("\"", ""),
> s(3).replaceAll("\"", ""),
> s(5)
> )
> )
> bank.collect()
> val mydf=bank.toDF()
> mydf.registerTempTable("mydf");
>
> Upto bank.collect() it works pretty well. However, I'm getting the
> following error on Ubuntu 14.04 when trying to execute the last two lines
> of my code:
>
> *java.lang.RuntimeException: java.lang.RuntimeException: Unable to
> instantiate org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient*
> at
> org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:522)
> at
> org.apache.spark.sql.hive.client.HiveClientImpl.<init>(HiveClientImpl.scala:171)
> at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
> at
> sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
> at
> org.apache.spark.sql.SQLImplicits.rddToDatasetHolder(SQLImplicits.scala:163)
> ... 46 elided
> *Caused by: java.lang.RuntimeException: Unable to instantiate
> org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient*
> at
> org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1523)
> at
> org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
> ... 70 more
> Caused by: java.lang.reflect.InvocationTargetException:
> javax.jdo.JDOFatalDataStoreException: Unable to open a test connection to
> the given database. JDBC url =
> jdbc:derby:;databaseName=metastore_db;create=true, username = APP.
> Terminating connection pool (set lazyInit to true if you expect to start
> your database after your app). Original Exception: ------
> at
> org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
>
> *Caused by: java.sql.SQLException: Failed to start database 'metastore_db'
> with class loader
> org.apache.spark.sql.hive.client.IsolatedClientLoader$$anon$1@48f2b61e, see
> the next exception for details.*
> at org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown
> Source)
> at
> org.apache.derby.impl.jdbc.SQLExceptionFactory40.wrapArgsForTransportAcrossDRDA(Unknown
> Source)
> ... 136 more
> Caused by: java.sql.SQLException: Database at
> /home/asif/zeppelin-0.6.2-bin-all/metastore_db has an incompatible format
> with the current version of the software. The database was created by or
> upgraded by version 10.11.
> at org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown
> Source)
> at
> org.apache.derby.impl.jdbc.SQLExceptionFactory40.wrapArgsForTransportAcrossDRDA(Unknown
> Source)
> at
> org.apache.derby.impl.jdbc.SQLExceptionFactory40.getSQLException(Unknown
> Source)
> at org.apache.derby.impl.jdbc.Util.generateCsSQLException(Unknown Source)
> ... 133 more
>
>
> *Caused by: ERROR XSLAN: Database at
> /home/asif/zeppelin-0.6.2-bin-all/metastore_db has an incompatible format
> with the current version of the software. The database was created by or
> upgraded by version 10.11. at
> org.apache.derby.iapi.error.StandardException.newException(Unknown
> Source)------*
> at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
> at
> sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
> at
> sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
> at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
> at
> org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
> ... 76 more
> *Caused by: javax.jdo.JDOFatalDataStoreException: Unable to open a test
> connection to the given database. JDBC url =
> jdbc:derby:;databaseName=metastore_db;create=true, username = APP.
> Terminating connection pool (set lazyInit to true if you expect to start
> your database after your app). Original Exception: ------*
> java.sql.SQLException: Failed to start database 'metastore_db' with class
> loader
> org.apache.spark.sql.hive.client.IsolatedClientLoader$$anon$1@48f2b61e,
> see the next exception for details.
>
>
> *Caused by: java.sql.SQLException: Failed to start database 'metastore_db'
> with class loader
> org.apache.spark.sql.hive.client.IsolatedClientLoader$$anon$1@48f2b61e, see
> the next exception for details. at
> org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown
> Source)*
> at
> org.apache.derby.impl.jdbc.SQLExceptionFactory40.wrapArgsForTransportAcrossDRDA(Unknown
> Source)
> ... 136 more
> Caused by: java.sql.SQLException: Database at
> /home/asif/zeppelin-0.6.2-bin-all/metastore_db has an incompatible format
> with the current version of the software. The database was created by or
> upgraded by version 10.11.
> at org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown
> Source)
> at
> org.apache.derby.impl.jdbc.SQLExceptionFactory40.wrapArgsForTransportAcrossDRDA(Unknown
> Source)
> at
> org.apache.derby.impl.jdbc.SQLExceptionFactory40.getSQLException(Unknown
> Source)
> at org.apache.derby.impl.jdbc.Util.generateCsSQLException(Unknown Source)
> ... 133 more
> *Caused by: ERROR XSLAN: Database at
> /home/asif/zeppelin-0.6.2-bin-all/metastore_db has an incompatible format
> with the current version of the software. The database was created by or
> upgraded by version 10.11.*
>
>
> *Caused by: org.apache.derby.impl.jdbc.EmbedSQLException: Failed to start
> database 'metastore_db' with class loader
> org.apache.spark.sql.hive.client.IsolatedClientLoader$$anon$1@48f2b61e, see
> the next exception for details.at
> org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown
> Source)*
> at
> org.apache.derby.impl.jdbc.SQLExceptionFactory40.wrapArgsForTransportAcrossDRDA(Unknown
> Source)
> ... 136 more
> *Caused by: org.apache.derby.impl.jdbc.EmbedSQLException: Database at
> /home/asif/zeppelin-0.6.2-bin-all/metastore_db has an incompatible format
> with the current version of the software. The database was created by or
> upgraded by version 10.11.*
> at org.apache.derby.impl.jdbc.SQLExceptionFactory.getSQLException(Unknown
> Source)
> at
> org.apache.derby.impl.jdbc.SQLExceptionFactory40.wrapArgsForTransportAcrossDRDA(Unknown
> Source)
> at
> org.apache.derby.impl.jdbc.SQLExceptionFactory40.getSQLException(Unknown
> Source)
> at org.apache.derby.impl.jdbc.Util.generateCsSQLException(Unknown Source)
> ... 133 more
>
> *Caused by: org.apache.derby.iapi.error.StandardException: Database at
> /home/asif/zeppelin-0.6.2-bin-all/metastore_db has an incompatible format
> with the current version of the software. The database was created by or
> upgraded by version 10.11.*
>
> Thanks and Regards,
> ---------------------------------
> *Md. Rezaul Karim*
> PhD Researcher, Insight Centre for Data Analytics
> National University of Ireland Galway
>
>
>
>
>
>
>
>
