Hi All,
I am trying to build the current develop/7 branch on my CentOS release
6.4 machine. This is failing during one of the test cases.
git status;
# On branch develop/7
# Untracked files:
# (use "git add <file>..." to include in what will be committed)
#
# binsrc/yacutia/vad.db
# binsrc/yacutia/vad.trx
# binsrc/yacutia/virtuoso.ini
# binsrc/yacutia/virtuoso.tdb
# binsrc/yacutia/xddl.xsd
# binsrc/yacutia/xddl_diff.xsl
# binsrc/yacutia/xddl_exec.xsl
# binsrc/yacutia/xddl_procs.xsd
# binsrc/yacutia/xddl_tables.xsd
# binsrc/yacutia/xddl_views.xsd
--note--
The binsrc/yacutia/* files are not being cleaned up by make clean.
Which might be a source of the problems.
--note--
rm -rf /scratch/virtuoso;
--note--
local scratch dir where I would like to see the resulting binaries
--note--
autogen.sh;
./configure --help --prefix=/scratch/virtuoso/
--exec-prefix=/scratch/virtuoso;
make clean;
make -j 4 ;
make install
Which failed at a point for creating "yacutia" (I think)
=====================================================================
= CREATING VAD PACKAGE FOR VIRTUOSO CONDUCTOR (mkvad.sh)
= Tue Nov 5 13:50:54 CET 2013
=====================================================================
VAD Sticker vad_fs.xml creation...
VAD Sticker vad_dav.xml creation...
*** Error S2801: [Virtuoso Driver]CL033: Connect failed to
localhost:1111 = localhost:1111.
at line 0 of Top-Level:
Starting Virtuoso server ...
Virtuoso server started
***FAILED: execution of DB.DBA.VAD_PACK('vad_dav.xml', '.',
'conductor_dav.vad')
------------ SQL ERROR -------------
*** Error 42VAD: [Virtuoso Driver][Virtuoso Server]Inexistent file
resource (./vad/vsp/conductor/folder_error.vspx)
at line 0 of Top-Level:
DB.DBA.VAD_PACK('vad_dav.xml', '.', 'conductor_dav.vad')
------------------------------------
***FAILED: execution of DB.DBA.VAD_PACK('vad_fs.xml', '.',
'conductor_filesystem.vad')
------------ SQL ERROR -------------
*** Error 42VAD: [Virtuoso Driver][Virtuoso Server]Inexistent file
resource (./vad/vsp/conductor/folder_error.vspx)
at line 0 of Top-Level:
DB.DBA.VAD_PACK('vad_fs.xml', '.', 'conductor_filesystem.vad')
------------------------------------
PASSED: checkpoint
PASSED: shutdown
=====================================================================
= Checking log file mkvad.output for statistics:
=
= Total number of tests PASSED : 2
= Total number of tests FAILED : 2
= Total number of tests ABORTED : 0
=====================================================================
*** Not all tests completed successfully
*** Check the file mkvad.output for more information
+ egrep "\*\*.*FAILED:|\*\*.*ABORTED:" mkvad.output
***FAILED: execution of DB.DBA.VAD_PACK('vad_dav.xml', '.',
'conductor_dav.vad')
***FAILED: execution of DB.DBA.VAD_PACK('vad_fs.xml', '.',
'conductor_filesystem.vad')
Regards,
Jerven
PS. was hoping to find out why I don't get a dev build
--
-------------------------------------------------------------------
Jerven Bolleman jerven.bolle...@isb-sib.ch
SIB Swiss Institute of Bioinformatics Tel: +41 (0)22 379 58 85
CMU, rue Michel Servet 1 Fax: +41 (0)22 379 58 58
1211 Geneve 4,
Switzerland www.isb-sib.ch - www.uniprot.org
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