On Friday, December 6, 2013 4:46:26 PM UTC-8, sonu kumar wrote: > > I tried but same error is coming.... > > If you enter the URL directly in the address box of your browser, can you get to the expected page?
I you try from a browser on the machine your web2py server is running on, can you get to the expected page? /dps > in my traceback I have seen line 397, from here problem is showing... > > *File /usr/lib64/python2.6/urllib2.py in open at line 397* code arguments > variables > Function argument list > > (self=<urllib2.OpenerDirector instance>, > fullurl='http://ww<http://www.uniprot.org/mapping/> > 'w.uniprot.org/mapping/ <http://www.uniprot.org/mapping/>, > data='to=MEROPS_ID&query=P22894&from=ID&format=tab', timeout=300) > Code listing > > 392. > 393. > 394. > 395. > 396. > 397. > > 398. > 399. > 400. > 401. > > > # post-process response > meth_name = protocol+"_response" > for processor in self.process_response.get(protocol, []): > meth = getattr(processor, meth_name) > response = meth(req, response) > > > return response > > def _open(self, req, data=None): > > Variablesmeth<bound method HTTPErrorProcessor.http_response of > <urllib2.HTTPErrorProcessor instance>>req<urllib2.Request instance> > response<addinfourl at 140652537300824 whose fp = None> > > > > On Friday, 6 December 2013 16:40:13 UTC-8, Michele Comitini wrote: >> >> the error is >> URLError: <urlopen error timed out> >> >> increase the timeout here to 300: >> >> responsemerops = opener.open('http://www.uniprot.org/mapping/', data, >> timeout=30) >> >> and see what happens >> >> >> 2013/12/7 sonu kumar <sonu.bioi...@gmail.com> >> >>> here is my Traceback... >>> >>> Traceback (most recent call last): >>> File "/opt/web-apps/web2py/gluon/restricted.py", line 217, in restricted >>> >>> exec ccode in environment >>> File >>> "/opt/web-apps/web2py/applications/CleavPredict/controllers/default.py", >>> line 1541, in <module> >>> >>> File "/opt/web-apps/web2py/gluon/globals.py", line 372, in <lambda> >>> >>> self._caller = lambda f: f() >>> >>> File >>> "/opt/web-apps/web2py/applications/CleavPredict/controllers/default.py", >>> line 557, in result >>> >>> return uniprot_merops() >>> File >>> "/opt/web-apps/web2py/applications/CleavPredict/controllers/default.py", >>> line 315, in uniprot_merops >>> >>> responsemerops = opener.open('http://www.uniprot.org/mapping/', data, >>> timeout=30) >>> >>> File "/usr/lib64/python2.6/urllib2.py", line 397, in open >>> >>> response = meth(req, response) >>> >>> File "/usr/lib64/python2.6/urllib2.py", line 510, in http_response >>> >>> 'http', request, response, code, msg, hdrs) >>> >>> File "/usr/lib64/python2.6/urllib2.py", line 429, in error >>> >>> result = self._call_chain(*args) >>> >>> File "/usr/lib64/python2.6/urllib2.py", line 369, in _call_chain >>> >>> result = func(*args) >>> File "/usr/lib64/python2.6/urllib2.py", line 616, in http_error_302 >>> >>> return self.parent.open(new, timeout=req.timeout) >>> >>> File "/usr/lib64/python2.6/urllib2.py", line 391, in open >>> >>> response = self._open(req, data) >>> >>> File "/usr/lib64/python2.6/urllib2.py", line 409, in _open >>> >>> '_open', req) >>> File "/usr/lib64/python2.6/urllib2.py", line 369, in _call_chain >>> >>> result = func(*args) >>> File "/usr/lib64/python2.6/urllib2.py", line 1190, in http_open >>> >>> return self.do_open(httplib.HTTPConnection, req) >>> >>> File "/usr/lib64/python2.6/urllib2.py", line 1165, in do_open >>> >>> raise URLError(err) >>> URLError: <urlopen error timed out> >>> >>> >>> On Thursday, 5 December 2013 16:34:29 UTC-8, sonu kumar wrote: >>> >>>> Hi All, >>>> >>>> In my application I am trying to call external weblink to map data but >>>> it always gives me <class 'urllib2.URLError'> <urlopen error timed >>>> out> error. >>>> >>>> I am using several times urllib for calling same weblinks for different >>>> mapping....Will this cause problem??? >>>> >>>> params = {'from':'ID', 'to':'MEROPS_ID', 'format':'tab', >>>> 'query':'P22894'} >>>> data = urllib.urlencode(params) >>>> request1 = urllib2.Request('http://www.uniprot.org/mapping/', >>>> data) >>>> response = urllib2.urlopen(request1, timeout=30) >>>> >>>> params3 = {'from':'ID', 'to':'P_ENTREZGENEID', 'format':'tab', >>>> 'query':'P22894'} >>>> coexdata = urllib.urlencode(params3) >>>> coexrequest = urllib2.Request('http://www.uniprot.org/mapping/', >>>> coexdata) >>>> coexresponse = urllib2.urlopen(coexrequest, timeout=30) >>>> >>>> params4 = {'from':'ID', 'to':'P_ENTREZGENEID', 'format':'tab', 'query': >>>> 'P22894'} >>>> data6 = urllib.urlencode(params4) >>>> requestmmpn = urllib2.Request('http://www.uniprot.org/mapping/', >>>> data6) >>>> responsemmpn = urllib2.urlopen(requestmmpn, timeout=30) >>>> >>>> >>>> I have seen one http_error_302 >>>> >>>> 611. >>>> 612. >>>> 613. >>>> 614. >>>> 615. >>>> 616. >>>> >>>> 617. >>>> 618. >>>> 619. >>>> 620. >>>> >>>> # Don't close the fp until we are sure that we won't use it >>>> # with HTTPError. >>>> fp.read() >>>> >>>> fp.close() >>>> >>>> return self.parent.open(new, timeout=req.timeout) >>>> >>>> >>>> http_error_301 = http_error_303 = http_error_307 = http_error_302 >>>> >>>> inf_msg = "The HTTP server returned a redirect error that would " \ >>>> >>>> >>>> any suggestion to solve this issue >>>> >>>> Thanks >>>> >>>> >>>> -- >>> Resources: >>> - http://web2py.com >>> - http://web2py.com/book (Documentation) >>> - http://github.com/web2py/web2py (Source code) >>> - https://code.google.com/p/web2py/issues/list (Report Issues) >>> --- >>> You received this message because you are subscribed to the Google >>> Groups "web2py-users" group. >>> To unsubscribe from this group and stop receiving emails from it, send >>> an email to web2py+un...@googlegroups.com. >>> For more options, visit https://groups.google.com/groups/opt_out. >>> >> >> -- Resources: - http://web2py.com - http://web2py.com/book (Documentation) - http://github.com/web2py/web2py (Source code) - https://code.google.com/p/web2py/issues/list (Report Issues) --- You received this message because you are subscribed to the Google Groups "web2py-users" group. 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