Hi, I also tried the -heap-arrays suggestion from intel to no avail. I believe the two packages you've mentioned, including revision 3 of the 2011 intel fortran compiler, should be all you need. As for the C compiler, I'm using gcc 4.6.1, which I believe is the standard version on Ubuntu 11.10. ---------------------------------------------------------------------------- Aaron Sutton Ph.D. Candidate | University of Toronto Office: McLennan MP090 | Phone: +1 416 946 3639 Email: asutton at physics.utoronto.ca
2011/11/23 Paul Fons <paul-fons at aist.go.jp>: > I am trying to compile Wien2K as well with the latest intel compilers. At > first I thought it might be a stack overflow problem (of course limit > stacksize was set to unlimited) and I tried the suggestion -heap-arrays from > intel > (http://software.intel.com/en-us/articles/determining-root-cause-of-sigsegv-or-sigbus-errors/) > but it did not help either. > Has any progress been made in tracking down the source of this error? The > traceback is essentially worthless. Has anyone corresponded with intel with > regards to the problem? > > I am now in the process of downloading an older version of the compiler. I > am a little worried about downloading having different versions of the > compiler as there is also C code in Wien2K. Exactly which versions of the > C, Fortran, and MKL libraries should be used. I have a copy of a Intel > Parallel Studio XE for Linux and don't typically download the individual > packages hence my confusion. > From what I understand, update 3 is the > I am downloading currently: > Fortran > l_fcompxe_2011.3.174.tgz > ]MKL > l_mkl_10.3.3.174.tgz > > > On Nov 11, 2011, at 6:04 AM, Aaron Sutton wrote: > > Great, thank you I will try this. I haven't seen this as I'm new to > the mailing list. I actually eliminated the the segmentation fault by > linking to libmkl_mc.so explicitly, this however has caused an error > in SECLR4. Don't think I'm further along, but at least the error is > different. > > ---------------------------------------------------------------------------- > Aaron Sutton > Ph.D. Candidate | University of Toronto > Office: McLennan MP090 | Phone: +1 416 946 3639 > Email: asutton at physics.utoronto.ca > > > > On Thu, Nov 10, 2011 at 15:48, Gavin Abo <gsabo at crimson.ua.edu> wrote: > > Hi Aaron, > > If you have been following some of the recent mailing list posts, I think > > this error is because of the intel compiler. I had the same or similar > > error with update 6. I never tried update 7, but it sounds like the > > compiler does not seem to be compiling the Wien2k code correctly like update > > 6. Try update 3 of Intel FORTRAN compiler & MKL > > library, which should be composerxe-2011.3.174. > > Gavin > > On 11/10/2011 2:31 PM, Aaron Sutton wrote: > > Hi, > > I am experiencing a segmentation fault when running WIEN2k compiled > > using the most recent version of the Intel FORTRAN compiler& MKL > > library (composer_xe_2011_sp1.7.256). The computer it's being run on > > is a 2009 Mac Pro with 2 quad core intel xeon 5500 series processors > > at 2.93GHz and 8GB RAM. The computer is natively running Ubuntu Linux > > 11.10 (though the same issue occurred while running 11.04). WIEN2k is > > compiled using the default flags and links provided by the Linux with > > Intel FORTRAN v12.0 + MKL option of siteconfig_lapw, no modifications. > > The software compiles without error. Upon running the software, either > > through the web interface or using run_lapw in the case directory, > > lapw0 completes successfully and then I receive: > > LAPW0 END > > forrtl: severe (174): SIGSEGV, segmentation fault occurred > > IMAGE PC > > ROUTINE LINE > > SOURCE > > libmkl_mc3.so 00002B0321624A30 Unknown > > Unknown Unknown > > stop error > > According to the intel compiler documentation, the libmkl_mc3 library > > is a kernel library specifically for core i7 type processors, which > > the Xeon 5500s are. I do not link specifically to libmkl_mc3.so > > anywhere as I am using the default options. I can report that this > > error does not occur on i3 or i5 processors. Any thoughts on how to > > remedy this situation? > > Thank you. > > ---------------------------------------------------------------------------- > > Aaron Sutton > > Ph.D. Candidate | University of Toronto > > Office: McLennan MP090 | Phone: +1 416 946 3639 > > Email: asutton at physics.utoronto.ca > > _______________________________________________ > > Wien mailing list > > Wien at zeus.theochem.tuwien.ac.at > > http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien > > > _______________________________________________ > > Wien mailing list > > Wien at zeus.theochem.tuwien.ac.at > > http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien > > _______________________________________________ > Wien mailing list > Wien at zeus.theochem.tuwien.ac.at > http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien > > Dr. Paul Fons > Functional Nano-phase-change Research Team > Team Leader > Nanodevice Innovation Research Center (NIRC) > National Institute for Advanced Industrial Science & Technology > METI > AIST Central 4, Higashi 1-1-1 > Tsukuba, Ibaraki JAPAN 305-8568 > tel. +81-298-61-5636 > fax. +81-298-61-2939 > email: paul-fons at aist.go.jp > The following lines are in a Japanese font > ?305-8562 ????????????? 1-1-1 > ????????? > ?????????????? > ???????????????????????? > ???????? > > > > > _______________________________________________ > Wien mailing list > Wien at zeus.theochem.tuwien.ac.at > http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien > >