At least on our SLURM system, mpirun is not supported and you have to
use srun instead.
In siteconfig, there is even an option "ifort + slurm"; why not trying
to use these defaults ?
Am 29.06.2018 um 00:23 schrieb venkatesh chandragiri:
Dear Wien2k users,
I have forwarded the suggestions given by Prof. Gavin as well as Prof.
Marks to the cluster administrator and now it seems that those earlier
errors was rectified. However, there are still more errors coming out
when I am submitting my job into SLURM based queuing process and still
lapw0 runs successfully but lapw1 crashes.
==========error=========================
==========uplapw1.error========
1** Error in Parallel LAPW1
2 ** LAPW1 STOPPED at Thu Jun 28 09:20:58 CST 2018
3 ** check ERROR FILES!
4 'INILPW' - can't open unit: 18
5 'INILPW' - filename: MnSb2.vspup
6 'INILPW' - status: old form: formatted
7 'LAPW1' - INILPW aborted unsuccessfully.
=========================================
============output============
*30 begin time is Thu Jun 28 09:20:50 CST 2018*
* 31 mpirun: Command not found.*
* 32 setrlimit(): WARNING: Cannot raise stack limit, continuing: Invalid
argument*
* 33 LAPW1 - Error*
* 34 setrlimit(): WARNING: Cannot raise stack limit, continuing: Invalid
argument*
* 35 LAPW1 - Error*
* 36 setrlimit(): WARNING: Cannot raise stack limit, continuing: Invalid
argument*
* 37 LAPW1 - Error*
===========================
============jobscript ======
After the #SBATCH commands and bash script for .machines
the commands for runsp_lapw is given below
109 wien2k=`runsp_lapw -NI -i 200 -ec 0.00001 -cc 0.0001 -p`
110 #yhrun -N 1 -p sz-renwei -n 24 $wien2k
111 #srun $wien2k
112 mpirun -n 24 -ppn 24 runsp_lapw -NI -i 200 -ec 0.00001 -cc 0.0001 -p
113 #mpirun -np 24 $wien2k
==========================
we tried to run different set of commands for runsp_lapw. All leads to
the same error as speified in the output
==============================
[renwei@ln3%th2 ~]$ which mpirun
/usr/local/mpi3/bin/mpirun
[renwei@ln3%th2 ~]$ whereis mpirun
mpirun: /opt/mpich/bin/mpirun
=============================
Is there somthing I am missing to include in mpirun command for SLURM
queuing system.
please help to find out where the problem is
thank you
with best regards
venkatesh
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