Use icc for fftw Search for and download: l_HPCKit_p_2021.1.0.2684.sh l_BaseKit_p_2021.1.0.2659.sh
Fingers crossed the depositories are still available. On Fri, Aug 29, 2025 at 7:34 AM Michael Fechtelkord via Wien < [email protected]> wrote: > Thanks Laurence for your suggestions! > > > 1) Using ifort / icc .. Compiling fftw3 with icx of the one-api package > and "make check" gives the same relink error during mpirun . > > 2) Unfortunately I have only the latest and last ifort version > > 3) Does not change anything for the compilation of fftw3 because it is > completely written in C and only linked to ifort in the WIEN2k compilation. > > > Thanks again for your help! > > > Best regards, > > Michael > > > Am 29.08.2025 um 13:35 schrieb Laurence Marks: > > This link may help: https://github.com/spack/spack/issues/48296 . It > appears to be an inconsistency between system libraries and ifort. Not easy > to cure. (There might be other pages, search with ifort + Relink.) > > Three possibilities: > 1. Compile fftw3 with ifort/icc. While ifort & gcc are supposed to be > compatible, it could be that they are using different system libraries. > 2. Regress to 2021.1.1 . I tested others and was not convinced they were > better, in fact they could be buggy. You don't have to uninstall other > versions, use a config file. > 3. Add -mcmodel=medium to your ifort line. I had to after a recent OS > update, although I cannot remember the exact reason why. > ___ > Emeritus Professor Laurence Marks (Laurie) > Department of Materials Science and Engineering, Northwestern University > www.numis.northwestern.edu > "Research is to see what everybody else has seen, and to think what nobody > else has thought" Albert Szent-Györgyi > > On Fri, Aug 29, 2025, 05:54 Michael Fechtelkord via Wien < > [email protected]> wrote: > >> Dear all, >> >> >> I am back now to ifort 2021.13 because it crashes much less as the new >> ifx compiler, also it produces omp errors using fftw3 during compilation. >> >> All worked fine since the last Open Suse Tumbleweed version using Kernel >> 6.16.3-1 (Opensuse Tumbleweed 202250827). Parallel Jobs terminate when >> using "mpirun" with the following error. The same error appears when I >> have compiled fftw 3.10 with gcc 15.1 and run "make check" the check >> routine crashes when using mpirun with the same error. >> >> >> Does somebody know what that relink error means and how to solve it? Is >> it maybe the opensuse libm.so.6 library (glibc version 2.42.1) causing >> the error, because the new version does not contain the symbol, libmpi >> is reqeusting? >> >> >> >> Best regards, >> >> Michael >> >> --------------- >> >> EXECUTING: mpirun -np 4 -machinefile .machine_nmrinteg >> /usr/local/WIEN2k/nmr_mpi -case MgF2 -mode integ -green >> >> /usr/local/WIEN2k/nmr_mpi: Relink >> `/opt/intel/oneapi/mpi/2021.13/lib/libmpi.so.12' with `/lib64/libm.so.6' >> for IFUNC symbol `modff' >> /usr/local/WIEN2k/nmr_mpi: Relink >> `/opt/intel/oneapi/mpi/2021.13/lib/libmpi.so.12' with `/lib64/libm.so.6' >> for IFUNC symbol `modff' >> /usr/local/WIEN2k/nmr_mpi: Relink >> `/opt/intel/oneapi/mpi/2021.13/lib/libmpi.so.12' with `/lib64/libm.so.6' >> for IFUNC symbol `modff' >> /usr/local/WIEN2k/nmr_mpi: Relink >> `/opt/intel/oneapi/mpi/2021.13/lib/libmpi.so.12' with `/lib64/libm.so.6' >> for IFUNC symbol `modff' >> >> >> =================================================================================== >> = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES >> = RANK 0 PID 396989 RUNNING AT localhost >> = KILLED BY SIGNAL: 11 (Segmentation fault) >> >> =================================================================================== >> >> >> =================================================================================== >> = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES >> = RANK 1 PID 396990 RUNNING AT localhost >> = KILLED BY SIGNAL: 11 (Segmentation fault) >> >> =================================================================================== >> >> >> =================================================================================== >> = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES >> = RANK 2 PID 396991 RUNNING AT localhost >> = KILLED BY SIGNAL: 11 (Segmentation fault) >> >> =================================================================================== >> >> >> =================================================================================== >> = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES >> = RANK 3 PID 396992 RUNNING AT localhost >> = KILLED BY SIGNAL: 11 (Segmentation fault) >> >> =================================================================================== >> >> stop >> >> /opt/fftw-3.3.10/mpi/.libs/mpi-bench: Relink >> `/opt/intel/oneapi/mpi/2021.13/lib/libmpi.so.12' with `/lib64/libm.so.6' >> for IFUNC symbol `modff' >> >> >> =================================================================================== >> = BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES >> = RANK 0 PID 183831 RUNNING AT planck >> = KILLED BY SIGNAL: 11 (Segmentation fault) >> >> =================================================================================== >> FAILED mpirun -np 1 /opt/fftw-3.3.10/mpi/mpi-bench: >> >> >> -- >> Dr. Michael Fechtelkord >> >> Institut für Geowissenschaften >> Ruhr-Universität Bochum >> Universitätsstr. 150 >> <https://www.google.com/maps/search/Universit%C3%A4tsstr.+150?entry=gmail&source=g> >> D-44780 Bochum >> >> Phone: +49 (234) 32-24380 >> Fax: +49 (234) 32-04380 >> Email:[email protected] >> Web Page: >> https://www.ruhr-uni-bochum.de/kristallographie/kc/mitarbeiter/fechtelkord/ >> >> _______________________________________________ >> Wien mailing list >> [email protected] >> http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien >> SEARCH the MAILING-LIST at: >> http://www.mail-archive.com/[email protected]/index.html >> > -- > Dr. Michael Fechtelkord > > Institut für Geowissenschaften > Ruhr-Universität Bochum > Universitätsstr. 150 > D-44780 Bochum > > Phone: +49 (234) 32-24380 > Fax: +49 (234) 32-04380 > Email: [email protected] > Web Page: > https://www.ruhr-uni-bochum.de/kristallographie/kc/mitarbeiter/fechtelkord/ > > _______________________________________________ > Wien mailing list > [email protected] > http://zeus.theochem.tuwien.ac.at/mailman/listinfo/wien > SEARCH the MAILING-LIST at: > http://www.mail-archive.com/[email protected]/index.html > -- Emeritus Professor Laurence Marks (Laurie) Northwestern University Webpage <http://www.numis.northwestern.edu> and Google Scholar link <http://scholar.google.com/citations?user=zmHhI9gAAAAJ&hl=en> "Research is to see what everybody else has seen, and to think what nobody else has thought", Albert Szent-Györgyi
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