Harej created this task.
Harej added a project: Wikidata-Query-Service.
Restricted Application added a subscriber: Aklapper.
Restricted Application added a project: Wikidata.
TASK DESCRIPTION
I have my own copy of Wikidata Query Service running on Amazon Neptune cloud
graph database, current as of 13 April 2020. When I run the updater script,
this happens:
bash-4.4# ./runUpdate.sh -h
https://wdqs-01.cnftyxmevx0z.us-east-1.neptune.amazonaws.com:8182 -S -v
Updating via
https://wdqs-01.cnftyxmevx0z.us-east-1.neptune.amazonaws.com:8182/sparql
OpenJDK 64-Bit Server VM warning: Cannot open file
/var/log/wdqs/wdqs-updater_jvm_gc.pid64.log due to No such file or directory
#logback.classic pattern: %d{HH:mm:ss.SSS} [%thread] %-5level %logger{36} -
%msg%n
21:02:22.455 [main] INFO org.wikidata.query.rdf.tool.Update - Starting
Updater 0.3.6-SNAPSHOT (82946c636b76d3f6475abb1235cee9277b7b5671)
21:02:23.335 [main] INFO o.w.q.r.t.change.ChangeSourceContext - Checking
where we left off
21:02:23.335 [main] INFO o.w.query.rdf.tool.rdf.RdfRepository - Checking
for left off time from the updater
21:02:23.687 [main] DEBUG o.w.q.rdf.tool.rdf.client.RdfClient - Completed
in 351 ms
21:02:23.707 [main] INFO o.w.query.rdf.tool.rdf.RdfRepository - Found left
off time from the updater
21:02:23.707 [main] INFO o.w.q.r.t.change.ChangeSourceContext - Found
start time in the RDF store: 2020-04-13T23:01:14Z
21:02:23.729 [main] DEBUG o.w.q.r.t.w.WikibaseRepository - Polling for
changes from
https://www.wikidata.org/w/api.php?format=json&action=query&list=recentchanges&rcdir=newer&rcprop=title%7Cids%7Ctimestamp&rcnamespace=0%7C120&rclimit=100&continue=&rcstart=2020-04-13T23%3A01%3A14Z
21:02:24.239 [main] INFO o.w.q.r.t.change.RecentChangesPoller - Got 83
changes, from Q68865240@1156993423@20200413230114|1195419846 to
Q34444452@1156993519@20200413230124|1195419946
21:02:24.244 [main] DEBUG org.wikidata.query.rdf.tool.Updater - 83 changes
in batch
21:02:24.696 [main] DEBUG o.w.q.rdf.tool.rdf.client.RdfClient - Completed
in 447 ms
21:02:24.696 [main] DEBUG org.wikidata.query.rdf.tool.Updater - Filtered
batch contains 1 changes
21:02:24.918 [main] DEBUG o.w.q.rdf.tool.rdf.client.RdfClient - Completed
in 221 ms
21:02:24.990 [main] DEBUG o.w.q.rdf.tool.rdf.client.RdfClient - Completed
in 47 ms
21:02:24.990 [main] DEBUG org.wikidata.query.rdf.tool.Updater - Fetched 1
values
21:02:24.990 [main] DEBUG org.wikidata.query.rdf.tool.Updater - Fetched 3
refs
21:02:24.991 [update 0] DEBUG org.wikidata.query.rdf.tool.Updater -
Processing data for Q42236@1156993435@20200413230115|1195419862
21:02:25.007 [update 0] DEBUG o.w.q.r.t.w.WikibaseRepository - Fetching rdf
from
https://www.wikidata.org/wiki/Special:EntityData/Q42236.ttl?flavor=dump&nocache=1588194144993
21:02:25.225 [update 0] DEBUG o.w.q.r.t.w.WikibaseRepository - Done in 233
ms
21:02:25.235 [main] DEBUG org.wikidata.query.rdf.tool.Updater - Preparing
update data took 245 ms, have 1 changes
21:02:25.239 [main] DEBUG o.w.query.rdf.tool.rdf.RdfRepository - Processing
1 IDs and 982 statements
21:02:25.249 [main] ERROR org.wikidata.query.rdf.tool.Update - Error during
updater run.
org.wikidata.query.rdf.tool.exception.ContainedException: Non-200 response
from triple store: HttpContentResponse[HTTP/1.1 400 Bad Request - 175 bytes]
body=
{"requestId":"8eb8e3df-b9ed-7c6e-f028-68d2e530b745","code":"MalformedQueryException","detailedMessage":"Malformed
query: QName 'ontolex:lexicalForm' uses an undefined prefix"}
at
org.wikidata.query.rdf.tool.rdf.client.RdfClient.execute(RdfClient.java:123)
at
org.wikidata.query.rdf.tool.rdf.client.RdfClient.query(RdfClient.java:78)
at
org.wikidata.query.rdf.tool.rdf.client.RdfClient.getEntityIds(RdfClient.java:210)
at
org.wikidata.query.rdf.tool.rdf.RdfRepository.fetchLexemeSubIds(RdfRepository.java:376)
at
org.wikidata.query.rdf.tool.rdf.RdfRepository.sendUpdateBatch(RdfRepository.java:322)
at
org.wikidata.query.rdf.tool.rdf.RdfRepository.syncFromChanges(RdfRepository.java:303)
at org.wikidata.query.rdf.tool.Updater.handleChanges(Updater.java:258)
at org.wikidata.query.rdf.tool.Updater.run(Updater.java:150)
at org.wikidata.query.rdf.tool.Update.run(Update.java:173)
at org.wikidata.query.rdf.tool.Update.main(Update.java:97)
Exception in thread "main"
org.wikidata.query.rdf.tool.exception.ContainedException: Non-200 response from
triple store: HttpContentResponse[HTTP/1.1 400 Bad Request - 175 bytes] body=
{"requestId":"8eb8e3df-b9ed-7c6e-f028-68d2e530b745","code":"MalformedQueryException","detailedMessage":"Malformed
query: QName 'ontolex:lexicalForm' uses an undefined prefix"}
at
org.wikidata.query.rdf.tool.rdf.client.RdfClient.execute(RdfClient.java:123)
at
org.wikidata.query.rdf.tool.rdf.client.RdfClient.query(RdfClient.java:78)
at
org.wikidata.query.rdf.tool.rdf.client.RdfClient.getEntityIds(RdfClient.java:210)
at
org.wikidata.query.rdf.tool.rdf.RdfRepository.fetchLexemeSubIds(RdfRepository.java:376)
at
org.wikidata.query.rdf.tool.rdf.RdfRepository.sendUpdateBatch(RdfRepository.java:322)
at
org.wikidata.query.rdf.tool.rdf.RdfRepository.syncFromChanges(RdfRepository.java:303)
at org.wikidata.query.rdf.tool.Updater.handleChanges(Updater.java:258)
at org.wikidata.query.rdf.tool.Updater.run(Updater.java:150)
at org.wikidata.query.rdf.tool.Update.run(Update.java:173)
at org.wikidata.query.rdf.tool.Update.main(Update.java:97)
@Addshore found this behavior mysterious and I am reporting it accordingly.
TASK DETAIL
https://phabricator.wikimedia.org/T251467
EMAIL PREFERENCES
https://phabricator.wikimedia.org/settings/panel/emailpreferences/
To: Harej
Cc: Harej, Addshore, Aklapper, darthmon_wmde, Nandana, Lahi, Gq86,
Lucas_Werkmeister_WMDE, GoranSMilovanovic, QZanden, EBjune, merbst,
LawExplorer, _jensen, rosalieper, Scott_WUaS, Jonas, Xmlizer, jkroll,
Wikidata-bugs, Jdouglas, aude, Tobias1984, Manybubbles, Mbch331
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