Bene added a comment.

  The exception during rebuildall is perhaps caused by the mainpage being in 
the main namespace which now has content model wikibase-item and expects a json 
structure. This can atm only be fixed by disabling Wikibase, moving or deleting 
the main page and enabling the extension again.
  
  The cross origin issue can somehow be fixed by changing the headers. I don't 
know if there is a nice way to do that in the vagrant role though.
  
  However, that shouldn't be the cause of the missing link to your repository 
wiki. A few strange things are happening: There are no sitelinks shown on the 
main wiki and only a broken sitelink on the enwiki. Perhaps there are some 
broken entries in your `sites` table in the database. What does that table 
currently contain?

TASK DETAIL
  https://phabricator.wikimedia.org/T130955

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To: Bene
Cc: JanZerebecki, Bene, daniel, Aklapper, Physikerwelt, D3r1ck01, Izno, 
Luke081515, mobrovac, Wikidata-bugs, aude, Mbch331, jeremyb



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