The use of genotypic assays is an effective and direct method to detect 
pathogen resistance. Methicillin resistance in Staphylococcus spp., vancomycin 
resistance in Enterococcus spp., and multi-antibiotic resistance in 
Mycobacterium spp. have been successfully evaluated by various genetic 
techniques. Genotypic approaches are usually based on the detection of 
resistance genes and thus provide a rapid, direct and sensitive assessment of 
resistance. 
https://www.ace-superbugs.com/detection-of-resistance-genes-in-superbugs.html
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