Hello Leonidas--

>  
> after successfully refined crystal structure based on RDCs and
> dihedral angles by refine.py script, i would like to ask if there is
> any script available if want to calculate a complex structure. I
> have the refined protein structure (bound), the bound conformation
> of a peptide and intermolecular NOEs (both ambiguous and
> unambiguous). Is  dock_tor_rigid.py script what I am looking for? 

I would suggest instead working from eginput/relaxRatio/dock.py in the
Xplor-NIH distribution, adding and switching out terms as
necessary. This later script is a bit more modern than
dock_tor_rigid.py

best regards--
Charles
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