-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1
Hi Blanton-- > I am trying to use the pdb2psf and seq2psf utilities to generate structure > files for an RNA. Whenever I create the .psf file all H2's are called H2''s this is due to a small bug. You should be able to fix it using the -rna flag with seq2psf. > and the amino notations are denoted HN' and HN''. this is due to explicit renaming in psfGen.py - around line 409. You can manually remove it if you would like. In the next release, this renaming will be made optional. Sorry for the confusion. regards-- Charles -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.6 (GNU/Linux) Comment: Processed by Mailcrypt 3.5.8 <http://mailcrypt.sourceforge.net/> iD8DBQFFivN2PK2zrJwS/lYRAr7vAJ9hUMu5BchsuV5kYPa05K/AWD/NXACdE0gt QUId+hoTJumDhpWbTNZQaj8= =WUX/ -----END PGP SIGNATURE-----
