Hi,
I used eginput/prot_prot/mkpfs_both.inp to make a two segment psf file (with xplornih2.19). My pdb file formats are not compatible with xplornih so I have used eginput/PSF_generation/addAtoms.py to obtain pdb files that are compatible with xplornih. The psf file I obtained from mkpfs_both.inp has HIS HD1 atoms. I input a pdb file for one of the segments used to make the psf file into addAtoms.py and the output pdb file has no HIS HD1 atoms even though the input pdb file had HIS HD1 atoms. What do I need to do to obtain a pdb file that contains HIS HD1 and is compatible with xplornih or a psf file that has no HIS HD1? Thanks, Jeff Ellena -------------- next part -------------- An HTML attachment was scrubbed... URL: http://dcb.cit.nih.gov/pipermail/xplor-nih/attachments/20080827/8f1bddaf/attachment.html
