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Hello Andrea--

> I am using vmd-xplor to calculate the E[NOE] as reported in
> http://www.cell.com/biophysj/abstract/S0006-3495(06)71992-0 paper. 
> the file.tbl is read properly and everything goes fine. I do:
> noe load 0 0 file.tbl
> noe calc
> and a series of violations are reported. Then, in the tcl console I
> get a number (i.e. 6.23) and I think that this is the E[NOE]. Is it
> right? 

That should be the noe cost.

> If so, what kind of unit is it? kcal/mol or kj/mol?
> 

kcal/mol. Note, that the graphical interface should be more intuitive.

best regards--


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