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Hello Massimiliano-- > I trying to calculate the structure of a DNA hairpin sequence (15 > nucleotides globally) - as I calculate the DNA template I get wrong > C1' chirality despite the IMPRoper and DIHEdral angles involving C1' > are, in my opinion well defined in the topology as in the parameter > files. The wrong chirality is conserved in each of the bases in the > subsequent step, too (calculation of a refined stucture due to NOE > restrictions). > What sort of script are you running? Which parameter file are you using? What sort of initial structure are you using? Of course, C1' chirality should be correct. best regards-- Charles -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.9 (GNU/Linux) Comment: Processed by Mailcrypt 3.5.8+ <http://mailcrypt.sourceforge.net/> iEYEARECAAYFAkolaQAACgkQPK2zrJwS/laG2wCfbn+EKtiqTIz0zx9ymye1u6ax 5n8An0jW03v+e3CirSpPUNfCHumeL8pO =roy1 -----END PGP SIGNATURE-----
