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Hello Aaron--

> 
> I am attempting to follow the examples from the PRE_DISTRIBUTE example files
> and am stuck when running the input file, geneTotal1.inp contained within
> the following directory:
> PRE_DISTRIBUTE/1_SetupALTs/Inputs
> 
> The problem seems to be related to the following two coordinate files:
> PRE_DISTRIBUTE/1_SetupALTs/Structures/conjugate_2.pdb
> PRE_DISTRIBUTE/1_SetupALTs/Structures/clockAtoms.pdb
> To the best of my knowledge these files are no where to be found within the
> PRE_DISTRIBUTE directories.
> 
> Any ideas where they can be obatained or what can be used in their place?
> 

Another suggestion is to work from the files in eginput/pre in the
Xplor-NIH distribution. The scripts there should (hopefully) be
significantly simpler and easier to make work.

best regards--
Charles
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