Hello Yoanes-- > I am Yoanes from Ghent University. Recently, we planned to calculate > structure based on NMR data regarding DNA:PNA-small molecule > conjugate complex. Is there a certain nomenclature to build the > topology and parameter files for PNA residues?
A good starting point might be the CHARMM PNA parameters- I am certain that these can be adapted for use in Xplor-NIH. You might obtain these parameters, and then contact me if you need assistance in building Xplor-NIH .top and .par files. best regards-- Charles ######################################################################## To unsubscribe from the XPLOR-NIH list, click the following link: http://list.nih.gov/cgi-bin/wa.exe?SUBED1=XPLOR-NIH&A=1
